bioRxiv directory

Laura S Kremer;Daniel M Bader;Christian Mertes;Robert Kopajtich;Garwin Pichler;Arcangela Iuso;Tobias B Haack;Elisabeth Graf;Thomas Schwarzmayr;Caterina Terrile;Eliska Konafikova;Birgit Repp;Gabi Kastenmüller;Jerzy Adamski;Peter Lichtner;Christoph Leonhardt;Benoit Funalot;Alice Donati;Valeria Tiranti;Anne Lombes;Claude Jardel;Dieter Gläser;Robert W Taylor;Daniele Ghezzi;Johannes A Mayr;Agnes Rötig;Peter Freisinger;Felix Distelmaier;Tim M Strom;Thomas Meitinger;Julien Gagneur;Holger Prokisch;

10.1101/066738 — Genetics — Posted on 2016-07-29

21 Negative selection in humans and fruit flies involves synergistic epistasis

Mashaal Sohail;Olga A Vakhrusheva;Jae Hoon Sul;Sara Pulit;Laurent Francioli;GoNL Consortium;Alzheimers Disease Neuroimaging Initiative;Leonard H van den Berg;Jan H Veldink;Paul de Bakker;Georgii A Bazykin;Alexey S Kondrashov;Shamil Sunyaev;

10.1101/066407 — Evolutionary Biology — Posted on 2016-07-29

22 Inconsistencies in C. elegans behavioural annotation

Balazs Szigeti;Thomas Stone;Barbara Webb;

10.1101/066787 — Neuroscience — Posted on 2016-07-29

23 The effect of crack cocaine addiction on the microstructure and morphology of the human striatum and thalamus using novel shape analysis and fast diffusion kurtosis imaging.

Eduardo A. Garza-Villarreal;M Mallar Chakravarty;Brian Hansen;Simon F Eskildsen;Gabriel A. Devenyi;Diana Castillo-Padilla;Thania Balducci-Garcia;Ernesto Reyes-Zamorano;Sune N Jespersen;Pamela Perez-Palacios;Raihaan Patel;Jorge J Gonzalez-Olvera;

10.1101/066647 — Neuroscience — Posted on 2016-07-29

24 Independent modes of ganglion cell translocation ensure correct lamination of the zebrafish retina

Jaroslav Icha;Christiane Grunert;Mauricio Rocha-Martins;Caren Norden;

10.1101/066761 — Developmental Biology — Posted on 2016-07-29

25 Cross-scale dynamics and the evolutionary emergence of infectious diseases

Sebastian J. Schreiber;Ruian Ke;Claude Loverdo;Miran Park;Priyanna Ahsan;James O. Lloyd-Smith;

10.1101/066688 — Epidemiology — Posted on 2016-07-29

26 Bright photoactivatable fluorophores for single-molecule imaging

Luke D Lavis;Jonathan B Grimm;Brian P English;Anand K Muthusamy;Brian P Mehl;Peng Dong;Timothy A Brown;Zhe Liu;Timothée Lionnet;

10.1101/066779 — Cell Biology — Posted on 2016-07-29

27 Receptive field formation by interacting excitatory and inhibitory synaptic plasticity

Claudia Clopath;Tim P Vogels;Robert C Froemke;Henning Sprekeler;

10.1101/066589 — Neuroscience — Posted on 2016-07-29

28 Optimizing for generalization in the decoding of internally generated activity in the hippocampus

Matthijs van der Meer;Alyssa A Carey;Youki Tanaka;

10.1101/066670 — Neuroscience — Posted on 2016-07-29

29 Examining the occupancy-density relationship for a low density carnivore

Daniel W. Linden;Angela K. Fuller;J. Andrew Royle;Matthew P. Hare;

10.1101/066662 — Ecology — Posted on 2016-07-29

30 Posterior parietal cortex guides visual decisions in rats

Angela M. Licata;Matthew T. Kaufman;David Raposo;Michael B. Ryan;John P. Sheppard;Anne K. Churchland;

10.1101/066639 — Neuroscience — Posted on 2016-07-29

31 Capture of Vibrio cholerae by charged polymers inhibits pathogeniciy by inducing a sessile lifestyle

Nicolas Perez-Soto;Lauren Moule;Daniel N Crisan;Ignacio Insua;Leanne M Taylor-Smith;Kerstin Voelz;Francisco Fernandez-Trillo;Anne Krachler;

10.1101/066563 — Microbiology — Posted on 2016-07-28

32 Cytomegalovirus Antigenic Mimicry of Human Alloreactive Peptides: A Potential Trigger for Graft versus Host Disease

Charles Hall;Vishal Koparde;Max Jameson-Lee;Abdelrhman Elnasseh;Allison Scalora;Jared Kobulnicky;Myrna Serrano;Catherine Roberts;Gregory Buck;Michael Neale;Daniel Nixon;Amir Toor;

10.1101/066571 — Immunology — Posted on 2016-07-28

33 Waves of chromatin modifications in mouse dendritic cells in response to LPS stimulation

Alexis Vandenbon;Yutaro Kumagai;Mengjie Lin;Yutaka Suzuki;Kenta Nakai;

10.1101/066472 — Genomics — Posted on 2016-07-28

34 Self-Organizing Global Gene Expression Regulated Through Criticality: Mechanism of the Cell-Fate Change

Masa Tsuchiya;Alessandro Giuliani;Midori Hashimoto;Jekaterina Erenpreisa;Kenichi Yoshikawa;

10.1101/066498 — Genomics — Posted on 2016-07-28

35 Genome-wide chemical mutagenesis screens allow unbiased saturation of the cancer genome and identification of drug resistance mutations.

Jonathan Brammeld;Mia Petljak;Carla Daniela Robles-Espinoza;Stacey Price;Syd Barthorpe;Patrick Tarpey;Constantine Alifrangis;Graham Bignell;Mathew Garnett;Jamie Young;Lucy Stebbings;Kathryn Beal;Michael R Stratton;Clara Montagut;Alba Dalmases;Beatriz Bellosillo;Joana Vidal;Julio Saez-Rodriguez;Luz Garcia Alonso;Francesco Iorio;Ultan McDermott;

10.1101/066555 — Genetics — Posted on 2016-07-28

36 Estimate of disease heritability using 4.7 million familial relationships inferred from electronic health records

Fernanda Polubriaginof;Kayla Quinnies;Rami Vanguri;Alexandre Yahi;Mary Simmerling;Iuliana Ionita-Laza;Hojjat Salmasian;Suzanne Bakken;George Hripcsak;David Goldstein;Krzysztof Kiryluk;David K Vawdrey;Nicholas P Tatonetti;

10.1101/066068 — Genetics — Posted on 2016-07-28

37 On the independent loci assumption in phylogenomic studies

W. Bryan Jennings;

10.1101/066332 — Evolutionary Biology — Posted on 2016-07-28

38 Sensitivity in binding free energies due to protein reorganization

Nathan M Lim;Lingle Wang;Robert Abel;David Mobley;

10.1101/066621 — Biophysics — Posted on 2016-07-28

39 de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer

Benjamin Istace;Anne Friedrich;Léo d'Agata;Sébastien Faye;Emilie Payen;Odette Beluche;Claudia Caradec;Sabrina Davidas;Corinne Cruaud;Gianni Liti;Arnaud Lemainque;Stefan Engelen;Patrick Wincker;Joseph Schacherer;Jean-Marc Aury;

10.1101/066613 — Bioinformatics — Posted on 2016-07-28

40 A tutorial on how (not) to over-interpret STRUCTURE/ADMIXTURE bar plots

Daniel Falush;Lucy van Dorp;Daniel Lawson;

10.1101/066431 — Genetics — Posted on 2016-07-28

41 Ingested double-stranded RNA and their mobile RNA derivatives have different requirements for gene silencing in C. elegans.

Pravrutha Raman;Soriayah Zaghab;Edward Traver;Antony Jose;

10.1101/066415 — Genetics — Posted on 2016-07-28

42 Projected spread of Zika virus in the Americas

Qian Zhang;Kaiyuan Sun;Matteo Chinazzi;Ana Pastore-Piontti;Natalie E Dean;Diana P Rojas;Stefano Merler;Dina Mistry;Piero Poletti;Luca Rossi;Margaret Bray;M. Elizabeth Halloran;Ira M Longini;Alessandro Vespignani;

10.1101/066456 — Epidemiology — Posted on 2016-07-29

43 Projected spread of Zika virus in the Americas

10.1101/066456 — Epidemiology — Posted on 2016-07-28

44 Evidence accumulation and change rate inference in dynamic environments

Adrian E Radillo;Alan Veliz-Cuba;Kresimir Josic;Zachary Kilpatrick;

10.1101/066480 — Neuroscience — Posted on 2016-07-28

45 A Dynamic Mode of Mitotic Bookmarking by Transcription Factors

Sheila S Teves;Luye An;Anders S Hansen;Liangqi Xie;Xavier Darzacq;Robert Tjian;

10.1101/066464 — Molecular Biology — Posted on 2016-07-28

46 Toxoplasma gondii establishes an extensive filamentous network consisting of stable F-actin during replication

Javier Periz;Jamie Whitelaw;Clare Harding;Leandro Lemgruber;Simon Gras;Madita Reimer;Robert Insall;Markus Meissner;

10.1101/066522 — Cell Biology — Posted on 2016-07-28

47 Genome Editing With Targeted Deaminases

Luhan Yang;Adrian Briggs;Wei Leong Chew;Prashant Mali;Marc Guell;John Aach;Daniel Goodman;David Cox;Yinan Kan;Emal Lesha;Venkataramanan Soundararajan;Feng Zhang;George Church;

10.1101/066597 — Bioengineering — Posted on 2016-07-28

48 Transient protein-protein interactions perturb E.coli metabolome and cause gene dosage toxicity

Sanchari Bhattacharyya;Shimon Bershtein;Jin Yan;Tijda Argun;Amy Gilson;Sunia Trauger;Eugene Shakhnovich;

10.1101/066373 — Systems Biology — Posted on 2016-07-27

49 Genome-wide methylation data mirror ancestry information

Elior Rahmani;Liat Shenhav;Regev Schweiger;Paul Yousefi;Karen Huen;Brenda Eskenazi;Celeste Eng;Scott Huntsman;Donglei Hu;Joshua Galanter;Sam Oh;Melanie Waldenberger;Konstantin Strauch;Harald Grallert;Thomas Meitinger;Christian Gieger;Nina Holland;Esteban Burchard;Noah Zaitlen;Eran Halperin;

10.1101/066340 — Genetics — Posted on 2016-07-27

50 Codon usage is a stochastic process across genetic codes of the kingdoms of life

Bohdan B. Khomtchouk;Claes Wahlestedt;Wolfgang Nonner;

10.1101/066381 — Genetics — Posted on 2016-07-27

51 Drosophila Mutants that Are Motile but Respond Poorly to All Stimuli Tested

Lar L Vang;Julius Adler;

10.1101/066423 — Animal Behavior and Cognition — Posted on 2016-07-27

52 Sequence based prediction of novel domains in the cellulosome of Ruminiclostridium thermocellum

Zarrin Basharat;Azra Yasmin;

10.1101/066357 — Microbiology — Posted on 2016-07-27

53 Depot Medroxyprogesterone Acetate is associated with increased Peripheral blood CD 3 and CD 4 T-Lymphocyte Counts among ART-Naive women living with HIV

Edwin Walong;Anne Barasa;Christopher Gontier;

10.1101/066225 — Immunology — Posted on 2016-07-30

54 Depot Medroxyprogesterone Acetate is associated with increased Peripheral blood CD 3 and CD 4 T-Lymphocyte Counts among ART-Naive women living with HIV

Edwin Walong;Anne Barasa;Christopher Gontier;

10.1101/066225 — Immunology — Posted on 2016-07-27

55 Origin and phylogenetic status of the local Ashanti Dwarf pig (ADP) of Ghana based 1 on evidence from mtDNA analysis, MC1R, and Y-chromosome haplotypes

Richard Osei-Amponsah;Benjamin M Skinner;Dennis Adjei;Julien Bauer;Greger Larson;Nabeel Affara;Carole A Sargent;

10.1101/066209 — Genomics — Posted on 2016-07-27

56 Background-dependent effects of selection on subclonal heterogeneity

Ignacio Vázquez-García;Francisco Salinas;Jing Li;Andrej Fischer;Benjamin Barré;Johan Hallin;Anders Bergström;Elisa Alonso-Perez;Jonas Warringer;Ville Mustonen;Gianni Liti;

10.1101/039859 — Genetics — Posted on 2016-07-27

57 Case Report: Aggressive Tibial Pseudarthrosis as Primary Symptom in Infant with Neurofibromatosis

Mary Alice Reid;Madeline Zupan;Nicole Sevison;Barbara Calhoun;Kasturi Haldar;

10.1101/066316 — Genetics — Posted on 2016-07-27

58 Genetic Regulation of Phenotypic Plasticity and Canalisation in Yeast Growth

Anupama Yadav;Kaustubh Dhole;Himanshu Sinha;

10.1101/066175 — Genetics — Posted on 2016-07-27

59 Metabolite exchange within the microbiome produces compounds that influence Drosophila behavior

Caleb N Fischer;Eric P Trautman;Jason M Crawford;Eric V Stabb;Nichole A Broderick;Jo Handelsman;

10.1101/066035 — Ecology — Posted on 2016-07-27

60 Evaluating approaches to find exon chains corresponding to long reads

Anna Kuosmanen;Veli Mäkinen;

10.1101/066241 — Bioinformatics — Posted on 2016-07-27

61 Structure, interaction and post-translational modification study of arsenic reduction system in Bifidobacterium longum

Zarrin Basharat;Azra Yasmin;

10.1101/066324 — Bioinformatics — Posted on 2016-07-27

62 RSAT matrix-clustering: dynamic exploration and redundancy reduction of transcription factor binding motif collections

Jaime Castro-Mondragon;Sebastien Jaeger;Denis Thieffry;Morgane Thomas-Chollier;Jacques van Helden;

10.1101/065565 — Bioinformatics — Posted on 2016-07-27

63 ADRes: a computational pipeline for detecting molecular markers of Anti-malarial Drug Resistance, from Sanger sequencing data

Setor Amuzu;Anita Ghansah;

10.1101/066183 — Bioinformatics — Posted on 2016-07-27

64 Mind over matter: A perceptual decision bias toward filled-in stimuli in the blind spot

Benedikt V Ehinger;Katja Häusser;José Ossandón;Peter König;

10.1101/066217 — Neuroscience — Posted on 2016-07-27

65 A common perceptual inference for cross-modally induced illusions of body schema

Zane Zheng;Kevin Munhall;Ingrid Johnsrude;

10.1101/066159 — Neuroscience — Posted on 2016-07-27

66 fMRI Dependent Components Analysis Reveals Dynamic Relations Between Functional Large Scale Cortical Networks

Uri Hertz;Daniel Zoran;Yair Weiss;Amir Amedi;

10.1101/066282 — Neuroscience — Posted on 2016-07-27

67 Axonal transcriptome of human stem cell derived neurons

Rebecca L Bigler;Joyce W Kamande;Raluca Dumitru;Mark Niedringhaus;Anne Marion Taylor;

10.1101/066142 — Neuroscience — Posted on 2016-07-27

68 Effect of sampling media and culture conditions on dendritic cell generation: ion depleted plasma negatively influences the survival of monocyte-derived dendritic cells

Zuzana Parackova;Jana Kayserova;Anna Sediva;

10.1101/066233 — Cell Biology — Posted on 2016-07-27

69 In vivo mapping of tissue- and subcellular-specific proteomes in Caenorhabditis elegans

Aaron W Reinke;Raymond Mak;Emily R Troemel;Eric J Bennett;

10.1101/066134 — Biochemistry — Posted on 2016-07-27

70 Robust ergodicity and tracking in antithetic integral control of stochastic biochemical reaction networks

Corentin Briat;Mustafa Khammash;

10.1101/065938 — Systems Biology — Posted on 2016-07-26

71 Massively parallel digital transcriptional profiling of single cells

Grace X.Y. Zheng;Jessica M Terry;Phillip Belgrader;Paul Ryvkin;Zachary W. Bent;Ryan Wilson;Solongo B. Ziraldo;Tobias D. Wheeler;Geoff P. McDermott;Junjie Zhu;Mark T. Gregory;Joe Shuga;Luz Montesclaros;Donald A Masquelier;Stefanie Y. Nishimura;Michael Schnall-Levin;Paul W Wyatt;Christopher M. Hindson;Rajiv Bharadwaj;Alexander Wong;Kevin D. Ness;Lan W. Beppu;Joachim Deeg;Christopher McFarland;Keith R. Loeb;William J. Valente;Nolan G. Ericson;Emily A. Stevens;Jerald P. Radich;Tarjei S. Mikkelsen;Benjamin J. Hindson;Jason H Bielas;

10.1101/065912 — Genomics — Posted on 2016-07-26

72 The druggable genome and support for target identification and validation in drug development

Chris Finan;Anna Gaulton;Felix Kruger;Tom Lumbers;Tina Shah;Jorgen Engmann;Luana Galver;Ryan Kelly;Anneli Karlsson;Rita Santos;John Overington;Aroon Hingorani;Juan Pablo Casas;

10.1101/066027 — Genetics — Posted on 2016-07-26

73 Meta-analysis reveals taxon- and life stage-dependent effects of ocean acidification on marine calcifier feeding performance

Jeff C Clements;

10.1101/066076 — Ecology — Posted on 2016-07-26

74 False Negatives Are a Significant Feature of Next Generation Sequencing Callsets

Dean Bobo;Mikhail Lipatov;Juan L. Rodriguez-Flores;Adam Auton;Brenna M Henn;

10.1101/066043 — Bioinformatics — Posted on 2016-07-26

75 Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the mega-reads algorithm

Aleksey V Zimin;Daniela Puiu;Ming-Cheng Luo;Tingting Zhu;Sergey Koren;James A. Yorke;Jan Dvorak;Steven Salzberg;

10.1101/066100 — Bioinformatics — Posted on 2016-07-26

76 Design: An assay based on single-polypeptide-chain heterodimeric A2AR/D2R and non-oligomerized fusions for in vivo analysis of their allosteric receptor-receptor interactions

Toshio KAMIYA;Takashi Masuko;Dasiel Oscar Borroto-Escuela;Haruo Okado;Hiroyasu Nakata;

10.1101/065250 — Biochemistry — Posted on 2016-07-26

77 The role of brain oscillations in predicting the sensory consequences of your actions

Liyu Cao;Gregor Thut;Joachim Gross;

10.1101/065961 — Neuroscience — Posted on 2016-07-26

78 The fail-safe mechanism of post-transcriptional silencing of unspliced HAC1 mRNA

Rachael Di Santo;Soufiane Aboulhouda;David E Weinberg;

10.1101/066118 — Molecular Biology — Posted on 2016-07-26

79 Microbial Communities are Well Adapted to Disturbances in Energy Input

Nuria Fernandez-Gonzalez;Julie A. Huber;Joseph J. Vallino;

10.1101/066050 — Microbiology — Posted on 2016-07-26

80 Genomic divergence, introduction history and latitudinal adaptation of grass carp

Le Wang;Yubang Shen;Jianjun Fu;Xiaoyan Xu;Gen Hua Yue;Jiale Li;

10.1101/066092 — Genetics — Posted on 2016-07-26

81 Within-host Evolution of Segments Ratio for the Tripartite Genome of Alfalfa Mosaic Virus

Beilei Wu;Mark P Zwart;Jesus A Sanchez-Navarro;Santiago F Elena;

10.1101/066084 — Evolutionary Biology — Posted on 2016-07-26

82 Discovery of Cancer Driver Long Noncoding RNAs across 1112 Tumour Genomes: New Candidates and Distinguishing Features.

Andres Lanzos;Joana Carlevaro-Fita;Loris Mularoni;Ferran Reverter;Emilio Palumbo;Roderic Guigo;Rory Johnson;

10.1101/065805 — Cancer Biology — Posted on 2016-07-26

83 Phosphoproteomics-based Profiling of Kinase Activities in Cancer Cells

Jakob Wirbel;Pedro Rodriguez Cutillas;Julio Saez-Rodriguez;

10.1101/066019 — Bioinformatics — Posted on 2016-07-26

84 AFNI and Clustering: False Positive Rates Redux

Robert W Cox;Richard C Reynolds;Paul A Taylor;

10.1101/065862 — Neuroscience — Posted on 2016-07-26

85 Genetic heterogeneity in depressive symptoms following the death of a spouse: Polygenic score analysis of the US Health and Retirement Study

Ben W Domingue;Hexuan Liu;Aysu Okbay;Daniel W. Belsky;

10.1101/065847 — Genetics — Posted on 2016-07-26

86 Genetic heterogeneity in depressive symptoms following the death of a spouse: Polygenic score analysis of the US Health and Retirement Study

Ben W Domingue;Hexuan Liu;Aysu Okbay;Daniel W. Belsky;

10.1101/065847 — Genetics — Posted on 2016-07-26

87 Feedforward and feedback frequency-dependent interactions in a large-scale laminar network of the primate cortex

Jorge F Mejias;John D Murray;Henry Kennedy;Xiao-Jing Wang;

10.1101/065854 — Neuroscience — Posted on 2016-07-26

88 A Novel Family of Genomics Islands Across Multiple Species of Streptococcus

Jing Wang;Changjun Wang;Weizhong Feng;Youjun Feng;Liming Zhi;Wenjuan Li;Yi Yao;Shibo Jiang;Jiaqi Tang;

10.1101/065920 — Microbiology — Posted on 2016-07-26

89 A generalized quantitative antibody homeostasis model: regulation of B-cell development by BCR saturation and novel insights into bone marrow function

Jozsef Prechl;

10.1101/065730 — Immunology — Posted on 2016-07-26

90 A generalized quantitative antibody homeostasis model: antigen saturation, natural antibodies and a quantitative antibody network

Jozsef Prechl;

10.1101/065748 — Immunology — Posted on 2016-07-26

91 Ostreococcus tauri is cobalamin-independent

Mark Pasek;

10.1101/065771 — Genomics — Posted on 2016-07-26

92 The Influence of Lymphoid Reconstitution Kinetics on Clinical Outcomes in Allogeneic Stem Cell Transplantation

David J Kobulnicky;Roy T Sabo;Shashank Sharma;Ali S Shubar Ali;Kristen Kobulnicky;Catherine Roberts;Alison Scalora;William Clark;Harold Chung;John M McCarty;Amir A Toor;

10.1101/065680 — Cancer Biology — Posted on 2016-07-26

93 Chaotic propagation of spatial cytoskeletal instability modulates integrity of podocyte foot processes

Cibele V Falkenberg;Evren U Azeloglu;Mark Stothers;Thomas J Deerinck;Yibang Chen;John C He;Mark H. Ellisman;James C. Hone;Ravi Iyengar;Leslie M. Loew;

10.1101/065839 — Biophysics — Posted on 2016-07-26

94 Chaotic propagation of spatial cytoskeletal instability modulates integrity of podocyte foot processes

Cibele V Falkenberg;Evren U Azeloglu;Mark Stothers;Thomas J Deerinck;Yibang Chen;John C He;Mark H. Ellisman;James C. Hone;Ravi Iyengar;Leslie M. Loew;

10.1101/065839 — Biophysics — Posted on 2016-07-26

95 Biophysical properties of human β-cardiac myosin with converter mutations that cause hypertrophic cardiomyopathy

Masataka Kawana;Saswata S Sarkar;Shirley Sutton;Kathleen M Ruppel;James Spudich;

10.1101/065649 — Biophysics — Posted on 2016-07-26

96 Cell type composition is the primary - but far from the only - power shaping temporal transcriptome of human brains

Qianhui Yu;Zhisong He;

10.1101/065292 — Bioinformatics — Posted on 2016-07-26

97 Mosaic Mutations in Blood DNA Sequence Are Associated with Solid Tumor Cancers

Mykyta Artomov;Manuel A. Rivas;Giulio Genovese;Mark J. Daly;

10.1101/065821 — Genetics — Posted on 2016-07-25

98 Rewired RNAi-Mediated Genome Surveillance in House Dust Mites

Md Mosharrof Hossain Mondal;Natalya Ortolano;Kelly Scott;Caleb Taylor;Pavel Klimov;Alex Flynt;

10.1101/065797 — Genomics — Posted on 2016-07-25

99 Evolution of passwords for cost-free, honest signalling between symbionts and hosts

Marco Archetti;J. Benjamin Miller;Douglas W. Yu;

10.1101/065755 — Evolutionary Biology — Posted on 2016-07-25

100 Ephemeral protein binding to DNA shapes stable nuclear bodies and chromatin domains

Chris A Brackley;Benno Liebchen;Davide Michieletto;Francois Mouvet;Peter R Cook;Davide Marenduzzo;

10.1101/065664 — — Posted on 2016-07-25

101 Connectivity map of bipolar cells and photoreceptors in the mouse retina

Christian Behrens;Timm Schubert;Silke Haverkamp;Thomas Euler;Philipp Berens;

10.1101/065722 — Neuroscience — Posted on 2016-07-26

102 Connectivity map of bipolar cells and photoreceptors in the mouse retina

Christian Behrens;Timm Schubert;Silke Haverkamp;Thomas Euler;Philipp Berens;

10.1101/065722 — Neuroscience — Posted on 2016-07-25

103 Distal axotomy enhances retrograde presynaptic excitability onto injured pyramidal neurons via trans-synaptic signaling

Tharkika Nagendran;Rebecca Bigler;Rylan Larsen;Benjamin Philpot;Anne Marion Taylor;

10.1101/065391 — Neuroscience — Posted on 2016-07-25

104 EEG functional network topology is associated with disability in patients with amyotrophic lateral sclerosis

Matteo Fraschini;Matteo Demuru;Arjan Hillebrand;Lorenza Cuccu;Silvia Porcu;Francesca Di Stefano;Monica Puligheddu;Gianluca Floris;Giuseppe Borghero;Francesco Marrosu;

10.1101/065714 — Neuroscience — Posted on 2016-07-27

105 EEG functional network topology is associated with disability in patients with amyotrophic lateral sclerosis

Matteo Fraschini;Matteo Demuru;Arjan Hillebrand;Lorenza Cuccu;Silvia Porcu;Francesca Di Stefano;Monica Puligheddu;Gianluca Floris;Giuseppe Borghero;Francesco Marrosu;

10.1101/065714 — Neuroscience — Posted on 2016-07-25

106 A qualitative model for the integration of conflicting exogenous and endogenous signals by dendritic cells

Quentin Marcou;Irit Carmi-Levy;Coline Trichot;Vassili Soumelis;Thierry Mora;Aleksandra Walczak;

10.1101/065706 — Immunology — Posted on 2016-07-25

107 The genome of the crustacean Parhyale hawaiensis: a model for animal development, regeneration, immunity and lignocellulose digestion

Damian Kao;Alvina G Lai;Evangelia Stamataki;Silvana Rosic;Nikolaos Konstantinides;Erin Jarvis;Alessia Di Donfrancesco;Natalia Pouchkina-Stantcheva;Marie Semon;Marco Grillo;Heather Bruce;Suyash Kumar;Igor Siwanowicz;Andy Le;Andrew Lemire;Michael Eisen;Cassandra Extavour;William Browne;Carsten Wolff;Michalis Averof;Nipam H Patel;Peter Sarkies;Anastasios Pavlopoulos;Aziz Aboobaker;

10.1101/065789 — Genomics — Posted on 2016-07-25

108 The genome of the crustacean Parhyale hawaiensis: a model for animal development, regeneration, immunity and lignocellulose digestion

10.1101/065789 — Genomics — Posted on 2016-07-25

109 Mechanisms of self-assembly and fibrillization of the prion-like domains

Yimei Lu;Liangzhong Lim;Yanming Tan;Lu Wang;Jianxing Song;

10.1101/065631 — Biophysics — Posted on 2016-07-25

110 Designing fecal microbiota transplant trials that account for differences in donor stool efficacy

Scott W. Olesen;Thomas Gurry;Eric J. Alm;

10.1101/065383 — Bioinformatics — Posted on 2016-07-25

111 Perturbation-response genes reveal signaling footprints in cancer gene expression

Michael Schubert;Bertram Klinger;Martina Klünemann;Mathew J Garnett;Nils Blüthgen;Julio Saez-Rodriguez;

10.1101/065672 — Bioinformatics — Posted on 2016-07-25

112 PHARMACOLOGY OF W-18 AND W-15

Xi-Ping Huang;Tao Che;Thomas Mangano;Valerie Le Rouzic;Ying-Xian Pan;Susruta Majumdar;Michael Cameron;Michael Bauman;Gavril Pasternak;Bryan L Roth;

10.1101/065623 — Neuroscience — Posted on 2016-07-24

113 Transformation and model choice for RNA-seq co-expression analysis

Andrea Rau;Cathy Maugis-Rabusseau;

10.1101/065607 — Bioinformatics — Posted on 2016-07-24

114 Beyond the myosin mesa: a potential unifying hypothesis on the underlying molecular basis of hyper-contractility caused by a majority of hypertrophic cardiomyopathy mutations

Suman Nag;Darshan V Trivedi;Saswata S Sarkar;Shirley Sutton;Kathleen M Ruppel;James A Spudich;

10.1101/065508 — Biochemistry — Posted on 2016-07-24

115 Defining the risk of Zika and chikungunya virus transmission in human population centers of the eastern United States

Carrie Manore;Richard Ostfeld;Folashade Agusto;Holly Gaff;Shannon LaDeau;

10.1101/061382 — Epidemiology — Posted on 2016-07-24

116 Patterns of individual variation in visual pathway structure and function in the sighted and blind

Geoffrey Karl Aguirre;Ritobrato Datta;Noah Benson;Sashank Prasad;Samuel G Jacobson;Artur V Cideciyan;Holly Bridge;Kate Watkins;Omar H Butt;Alexsandra S Dain;Lauren Brandes;Efstathios Gennatas;

10.1101/065441 — Neuroscience — Posted on 2016-07-23

117 TelomereHunter: telomere content estimation and characterization from whole genome sequencing data

Lars Feuerbach;Lina Sieverling;Katharina Deeg;Philip Ginsbach;Barbara Hutter;Ivo Buchhalter;Paul A Northcott;Peter Lichter;Stefan M Pfister;David TW Jones;Karsten Rippe;Benedikt Brors;

10.1101/065532 — Bioinformatics — Posted on 2016-07-23

118 An introduction to linear stability analysis for deciphering spatial patterns in signaling networks

Jasmine Nirody;Padmini Rangamani;

10.1101/065474 — Systems Biology — Posted on 2016-07-23

119 Neuroendocrine Modulation Sustains the C. elegans Forward Motor State

Maria A. Lim;Jyothsna Chitturi;Valeriya Laskova;Jun Meng;Daniel Findeis;Anne Wiekenberg;Ben Mulcahy;Linjiao Luo;Yan Li;Yangning Lu;Wesley Hung;Yixin Qu;Chi-Yip Ho;Douglas Holmyard;Ni Ji;Rebecca WcWhirter;Aravinthan D. T. Samuel;David Miller;Ralf Schnabel;John Calarco;Mei Zhen;

10.1101/065235 — Neuroscience — Posted on 2016-07-23

120 Enhanced representation of space by prefrontal neuronal ensembles and its dependence on cognitive states

Mohammad-Reza Dehaqani;Abdol-Hossein Vahabie;Mohammadbagher Parsa;Behrad Noudoost;Alireza Soltani;

10.1101/065581 — Neuroscience — Posted on 2016-07-23

121 Massively multiplex single-cell Hi-C

Vijay Ramani;Xinxian Deng;Kevin L Gunderson;Frank J Steemers;Christine M Disteche;William S Noble;Zhijun Duan;Jay Shendure;

10.1101/065052 — Genomics — Posted on 2016-07-23

122 Construction of thousands of single cell genome sequencing libraries using combinatorial indexing

Sarah A Vitak;Kristof A Torkenczy;Jimi L Rosenkrantz;Andrew J Fields;Lena Christiansen;Melissa H Wong;Lucia Carbone;Frank J Steemers;Andrew Adey;

10.1101/065482 — Genomics — Posted on 2016-07-23

123 Cost-effectiveness of pharmacogenetic-guided treatment: are we there yet?

Moira Verbelen;Michael E Weale;Cathryn M Lewis;

10.1101/065540 — Genetics — Posted on 2016-07-23

124 Global population divergence and admixture of the brown rat (Rattus norvegicus)

Emily Puckett;Jane Park;Matthew Combs;Michael J Blum;Juliet E Bryant;Adalgisa Caccone;Federico Costa;Eva E Deinum;Alexander Esther;Chelsea G Himsworth;Peter D Keightley;Albert Ko;Ake Lundkvist;Lorraine M McElhinney;Serge Morand;Judith Robins;James Russell;Tanja M Strand;Olga Suarez;Lisa Yon;Jason Munshi-South;

10.1101/065458 — Evolutionary Biology — Posted on 2016-07-23

125 Numerical aspect of Predator-Pray Model

Monika Justyna Nir;Sarangam Majumdar;

10.1101/065516 — — Posted on 2016-07-23

126 Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array

Jean-Philippe Fortin;Timothy Triche;Kasper Hansen;

10.1101/065490 — Bioinformatics — Posted on 2016-07-23

127 Genome size variation and species diversity in salamander families

Bianca Sclavi;John Herrick;

10.1101/065425 — Evolutionary Biology — Posted on 2016-07-22

128 High Phylogenetic Utility of an Ultraconserved Element Probe Set Designed for Arachnida

James Starrett;Shahan Derkarabetian;Marshal Hedin;Robert W Bryson;John E McCormack;Brant C Faircloth;

10.1101/065201 — Genomics — Posted on 2016-07-22

129 The quantity of Neanderthal DNA in modern humans: a reanalysis relaxing the assumption of constant mutation rate.

William Amos;

10.1101/065359 — Evolutionary Biology — Posted on 2016-07-27

130 The quantity of Neanderthal DNA in modern humans: a reanalysis relaxing the assumption of constant mutation rate.

William Amos;

10.1101/065359 — Evolutionary Biology — Posted on 2016-07-22

131 Morphological structure of ant assemblages in tropical and temperate forests

Rogério R. Silva;Israel Del Toro;Carlos R. F. Brandão;Aaron M. Ellison;

10.1101/065417 — Ecology — Posted on 2016-07-22

132 Quantitative, image-based phenotyping methods provide insight into spatial and temporal dimensions of plant disease

Andrew M. Mutka;Sarah J. Fentress;Joel W. Sher;Jeffrey C. Berry;Chelsea Pretz;Dmitri A. Nusinow;Rebecca Bart;

10.1101/064980 — Plant Biology — Posted on 2016-07-22

133 The dynamics of resting fluctuations in the brain: metastability and its dynamical cortical core

Gustavo Deco;Morten L Kringelbach;Viktor Jirsa;Petra Ritter;

10.1101/065284 — Neuroscience — Posted on 2016-07-22

134 Privatization of a breeding resource by the burying beetle /Nicrophorus vespilloides/ is associated with shifts in bacterial communities

Ana Duarte;Martin Welch;Josef Wagner;Rebecca M Kilner;

10.1101/065326 — Ecology — Posted on 2016-07-22

135 On numerical study of Parkinson tremor

Annalakshmi Harikrishna;Dennis Eﬀah Osei;Magdalena Weronika Kaminska;Sarangam Majumdar;

10.1101/065318 — Biophysics — Posted on 2016-07-22

136 Probabilistic adaptation in changing microbial environments

Yarden Katz;Michael Springer;

10.1101/065243 — Systems Biology — Posted on 2016-07-22

137 Genomic infectious disease epidemiology in partially sampled and ongoing outbreaks

Xavier Didelot;Christophe Fraser;Jennifer Gardy;Caroline Colijn;

10.1101/065334 — Epidemiology — Posted on 2016-07-22

138 A Rationally Designed Aminoacyl-tRNA Synthetase for Genetically Encoded Fluorescent Amino Acids

Ximena Steinberg;Jason Galpin;Gibran Nasir;Jose Sepulveda-Ugarte;Romina Sepulveda;Fernando Gonzalez-Nilo;Leon D Islas;Christopher A Ahern;Sebastian E Brauchi;

10.1101/065227 — Biochemistry — Posted on 2016-07-22

139 Introducing py_emra: the Python module for Ensemble Modeling Robustness Analysis

Matthew Theisen;

10.1101/065177 — Systems Biology — Posted on 2016-07-21

140 Nkx2.1 regulates the proliferation and cell fate of telencephalic astrocytes during embryonic development

Shilpi Minocha;Delphine Valloton;Yvan Arsenijevic;Jean-Rene Cardinaux;Raffaella Dreier Guidi;Jean-Pierre Hornung;Cecile Lebrand;

10.1101/065169 — Neuroscience — Posted on 2016-07-21

141 Understanding How Microbiomes Influence the Systems they Inhabit: Insight from Ecosystem Ecology

Ed Hall;Emily Bernhardt;Raven Bier;Mark Bradford;Claudia Boot;Jim Cotner;Paul del Giorgio;Sarah Evans;Emily Graham;Stuart Jones;Jay Lennon;Ken Locey;Diana Nemergut;Brooke Osborne;Jenny Rocca;Josh Schimel;Matt Wallenstein;

10.1101/065128 — Microbiology — Posted on 2016-07-21

142 Population and individual effects of non-coding variants inform genetic risk factors

Mauro Pala;Zachary Zappala;Mara Marongiu;Xin Li;Joe R Davis;Roberto Cusano;Francesca Crobu;Kimberly R Kukurba;Frederic Reiner;Riccardo Berutti;Maria G Piras;Antonella Mulas;Magdalena Zoledziewska;Michele Marongiu;Fabio Busonero;Andrea Maschio;Maristella Steri;Carlo Sidore;Serena Sanna;Edoardo Fiorillo;Alexis Battle;John Novembre;Chris Jones;Andrea Angius;Goncalo R Abecasis;David Schlessinger;Francesco Cucca;Stephen B Montgomery;

10.1101/065144 — Genomics — Posted on 2016-07-21

143 Generalization of the Ewens sampling formula to arbitrary fitness landscapes

Pavel Khromov;Constantin D Malliaris;Alexandre V Morozov;

10.1101/065011 — Genetics — Posted on 2016-07-21

144 Exact calculation of the joint allele frequency spectrum for generalized isolation with migration models

Andrew Kern;Jody Hey;

10.1101/065003 — Evolutionary Biology — Posted on 2016-07-21

145 Dispersal: a central and independent trait in life history

Dries Bonte;Maxime Dahirel;

10.1101/065151 — Ecology — Posted on 2016-07-21

146 Gene regulation mechanism in drought-responsive grapevine leaves as revealed by transcriptomic analysis

Haider Muhammad Salman;Cheng Zhang;Tariq Pervaiz;Ting Zheng;Chao bo Zhang;Chen Lide;Lingfie Shangguan;Jinggui Fang;

10.1101/065136 — Molecular Biology — Posted on 2016-07-21

147 S2 from Equine infectious anemia virus is an infectivity factor which counteracts the retroviral inhibitors SERINC5 and SERINC3

Ajit Chande;Emilia Cuccurullo;Annachiara Rosa;Serena Ziglio;Susan Carpenter;Massimo Pizzato;

10.1101/065078 — Microbiology — Posted on 2016-07-21

148 Colocalization of GWAS and eQTL Signals Detects Target Genes

Farhad Hormozdiari;Martijn van de Bunt;Ayellet V. Segre;Xiao Li;Jong Wha J Joo;Michael Bilow;Jae Hoon Sul;Sriram Sankararaman;Bogdan Pasaniuc;Eleazar Eskin;

10.1101/065037 — Genetics — Posted on 2016-07-21

149 Tissue-specificity of gene expression diverges slowly between orthologs, and rapidly between paralogs

Nadezda Kryuchkova-Mostacci;Marc Robinson-Rechavi;

10.1101/065086 — Evolutionary Biology — Posted on 2016-07-21

150 Flexibility of co-evolutionary patterns in ectoparasite populations: genetic structure and diversity in Apodemus mice and their lice.

Jana Martinu;Vaclav Hypsa;Jan Stefka;

10.1101/065060 — Evolutionary Biology — Posted on 2016-07-21

151 Structure of Topologically Associating Domains and gene regulation embedded in the 5C data revealed by a polymer model and stochastic simulations

Ofir Shukron;David Holcman;

10.1101/065102 — Biophysics — Posted on 2016-07-21

152 Modelling dropouts allows for unbiased identification of marker genes in scRNASeq experiments

Tallulah S. Andrews;Martin Hemberg;

10.1101/065094 — Bioinformatics — Posted on 2016-07-21

153 Short Tandem Repeat stutter model inferred from direct measurement of in vitro stutter noise

Ofir Raz;Tamir Biezuner;Adam Spiro;Shiran Amir;Lilach Milo;Alon Titelman;Amos Onn;Uriel Feige;Ehud Shapiro;

10.1101/065110 — Bioinformatics — Posted on 2016-07-21

154 Structure in the variability of the basic reproductive number (R0) for Zika epidemics in the Pacific islands

Clara Champagne;David G Salthouse;Richard Paul;Van-Mai Cao-Lormeau;Benjamin Roche;Bernard Cazelles;

10.1101/064949 — Epidemiology — Posted on 2016-07-20

155 Altered hippocampal interneuron activity precedes ictal onset

Mitra L Miri;Martin Vinck;Rima Pant;Jessica A Cardin;

10.1101/064956 — Neuroscience — Posted on 2016-07-20

156 Protection against maternal infection-associated fetal growth restriction - proof-of-concept with a microbial-derived immunomodulator OM85: safety and efficacy data

Naomi Scott;Jeff Lauzon-Joset;Anya Jones;Kyle Mincham;Niamh Troy;Jonatan Leffler;Michael Serralha;Susan Prescott;Sarah Robertson;Christian Pasquali;Anthony Bosco;Patrick Holt;Deborah Strickland;

10.1101/064857 — Immunology — Posted on 2016-07-20

157 Candidate gene scan for Single Nucleotide Polymorphisms involved in the determination of normal variability in human craniofacial morphology

Mark Barash;Philipp E. Bayer;Angela van Daal;

10.1101/060814 — Genetics — Posted on 2016-07-20

158 Functional and non-functional classes of peptides produced by long non-coding RNAs

Jorge Ruiz-Orera;Pol Verdaguer-Grau;José Luis Villanueva-Cañas;Xavier Messeguer;M Mar Albà;

10.1101/064915 — Evolutionary Biology — Posted on 2016-07-21

159 Functional and non-functional classes of peptides produced by long non-coding RNAs

Jorge Ruiz-Orera;Pol Verdaguer-Grau;José Luis Villanueva-Cañas;Xavier Messeguer;M Mar Albà;

10.1101/064915 — Evolutionary Biology — Posted on 2016-07-20

160 The evolutionary origin of bilaterian smooth and striated myocytes

Thibaut Brunet;Antje H. L. Fischer;Patrick R. H. Steinmetz;Antonella Lauri;Paola Bertucci;Detlev Arendt;

10.1101/064881 — Evolutionary Biology — Posted on 2016-07-20

161 On phylogenetic branch lengths distribution and the late acquistion of mitochondria.

Alexandros A. Pittis;Toni Gabaldon;

10.1101/064873 — Evolutionary Biology — Posted on 2016-07-20

162 A cascade of destabilizations: combining Wolbachia and Allee effects to eradicate insect pests

Julie C Blackwood;Roger Vargas;Xavier Fauvergue;

10.1101/064774 — Ecology — Posted on 2016-07-20

163 Comparison of aggregation methods for multiphenotype exomic variant prioritization

Alejandro Sifrim;Dusan Popovic;Joris R. Vermeesch;Jan Aerts;Bart De Moor;Yves Moreau;

10.1101/064899 — Bioinformatics — Posted on 2016-07-20

164 CRISPR-Cas9 mediated mutagenesis of a DMR6 ortholog in tomato confers broad-spectrum disease resistance

Daniela Paula de Toledo Thomazella;Quinton Brail;Douglas Dahlbeck;Brian J Staskawicz;

10.1101/064824 — Plant Biology — Posted on 2016-07-23

165 CRISPR-Cas9 mediated mutagenesis of a DMR6 ortholog in tomato confers broad-spectrum disease resistance

Daniela Paula de Toledo Thomazella;Quinton Brail;Douglas Dahlbeck;Brian J Staskawicz;

10.1101/064824 — Plant Biology — Posted on 2016-07-22

166 CRISPR-Cas9 mediated mutagenesis of a DMR6 ortholog in tomato confers broad-spectrum disease resistance

Daniela Paula de Toledo Thomazella;Quinton Brail;Douglas Dahlbeck;Brian J Staskawicz;

10.1101/064824 — Plant Biology — Posted on 2016-07-20

167 A scored human protein-protein interaction network to catalyze genomic interpretation

Taibo Li;Rasmus Wernersson;Rasmus Borup Hansen;Heiko Horn;Johnathan M Mercer;Greg Slodkowicz;Christopher Workman;Olga Regina;Kristoffer Rapacki;Hans-Henrik Staerfeldt;Soren Brunak;Thomas S Jensen;Kasper Lage;

10.1101/064535 — Genomics — Posted on 2016-07-26

168 A scored human protein-protein interaction network to catalyze genomic interpretation

10.1101/064535 — Genomics — Posted on 2016-07-19

169 SMRT Genome Assembly Corrects Reference Errors, Resolving the Genetic Basis of Virulence in Mycobacterium tuberculosis

Afif Elghraoui;Samuel J Modlin;Faramarz Valafar;

10.1101/064840 — Genomics — Posted on 2016-07-21

170 SMRT Genome Assembly Corrects Reference Errors, Resolving the Genetic Basis of Virulence in Mycobacterium tuberculosis

Afif Elghraoui;Samuel J Modlin;Faramarz Valafar;

10.1101/064840 — Genomics — Posted on 2016-07-19

171 An aging-independent replicative lifespan in a symmetrically dividing eukaryote

Eric C. Spivey;Stephen K. Jones;James R. Rybarski;Fatema A. Saifuddin;Ilya J. Finkelstein;

10.1101/064832 — Cell Biology — Posted on 2016-07-19

172 Genome urbanization: Clusters of topologically co-regulated genes delineate functional compartments in the genome of S. cerevisiae

Maria Tsochatzidou;Maria Malliarou;Joaquim Roca;Christoforos Nikolaou;

10.1101/064667 — Genomics — Posted on 2016-07-20

173 Genome urbanization: Clusters of topologically co-regulated genes delineate functional compartments in the genome of S. cerevisiae

Maria Tsochatzidou;Maria Malliarou;Joaquim Roca;Christoforos Nikolaou;

10.1101/064667 — Genomics — Posted on 2016-07-19

174 A clonally reproducing generalist aphid pest colonises diverse host plants by rapid transcriptional plasticity of duplicated gene clusters

Thomas C Mathers;Yazhou Chen;Gemy Kaithakottil;Fabrice Legeai;Sam T Mugford;Patrice Baa-Puyoulet;Anthony Bretaudeau;Bernardo Clavijo;Stefano Colella;Olivier Collin;Tamas Dalmay;Thomas Derrien;Honglin Feng;Toni Gabaldón;Anna Jordan;Irene Julca;Graeme J Kettles;Krissana Kowitwanich;Dominique Lavenier;Paolo Lenzi;Sara Lopez-Gomollon;Damian Loska;Daniel Mapleson;Florian Maumus;Simon Moxon;Daniel R G Price;Akiko Sugio;Manuella van Munster;Marilyne Uzest;Darren Waite;Georg Jander;Denis Tagu;Alex C C Wilson;Cock van Oosterhout;David Swarbreck;Saskia A Hogenhout;

10.1101/063610 — Genomics — Posted on 2016-07-19

175 Towards robust evolutionary inference with integral projection models

Maria Joao Janeiro;Marco Festa-Bianchet;Fanie Pelletier;David W Coltman;Michael B Morrissey;

10.1101/064618 — Evolutionary Biology — Posted on 2016-07-19

176 Resolution and reconciliation of non-binary gene trees with transfers, duplications and losses

Edwin Jacox;Mathias Weller;Eric Tannier;Celine Scornavacca;

10.1101/064675 — Bioinformatics — Posted on 2016-07-19

177 Whose sample is it anyway? Widespread misannotation of samples in transcriptomics studies

Lilah Toker;Min Feng;Paul Pavlidis;

10.1101/064626 — Bioinformatics — Posted on 2016-07-19

178 Beyond APs and VPs: evidences of chaos and self-organized criticality in electrical signals in plants.

Gustavo Maia Souza;Gustavo Francisco Rosalim Saraiva;Arlan Silva Ferreira;

10.1101/064790 — Plant Biology — Posted on 2016-07-19

179 A causal role for right frontopolar cortex in directed, but not random, exploration.

Wojciech K. Zajkowski;Robert C. Wilson;Malgorzata Kossut;

10.1101/064741 — Neuroscience — Posted on 2016-07-19

180 KAT: A K-mer Analysis Toolkit to quality control NGS datasets and genome assemblies

Daniel Mapleson;Gonzalo Garcia Accinelli;George Kettleborough;Jonathan Wright;Bernardo J. Clavijo;

10.1101/064733 — Bioinformatics — Posted on 2016-07-19

181 Maternal immune activation dysregulation of the fetal brain transcriptome and relevance to the pathophysiology of autism spectrum disorder

Michael V Lombardo;Hyang Mi Moon;Jennifer Su;Theo D Palmer;Eric Courchesne;Tiziano Pramparo;

10.1101/064683 — Genomics — Posted on 2016-07-21

182 Maternal immune activation dysregulation of the fetal brain transcriptome and relevance to the pathophysiology of autism spectrum disorder

Michael V Lombardo;Hyang Mi Moon;Jennifer Su;Theo D Palmer;Eric Courchesne;Tiziano Pramparo;

10.1101/064683 — Genomics — Posted on 2016-07-19

183 Genetic loci associated with coronary artery disease harbor evidence of selection and antagonistic pleiotropy

Sean G Byars;Qinqin Huang;Lesley-Ann Gray;Samuli Ripatti;Gad Abraham;Stephen C Stearns;Michael Inouye;

10.1101/064758 — Genomics — Posted on 2016-07-19

184 Ethological principles predict the neuropeptides co-opted to influence parenting.

Christopher B Cunningham;Majors J Badgett;Richard B Meagher;Ron Orlando;Allen J Moore;

10.1101/064808 — Genetics — Posted on 2016-07-19

185 The population tracking model: A simple, scalable statistical model for neural population data

Cian O'Donnell;J Tiago Goncalves;Nick Whiteley;Carlos Portera-Cailliau;Terrence J Sejnowski;

10.1101/064717 — Neuroscience — Posted on 2016-07-19

186 Divisive suppression explains high-precision firing and contrast adaptation in retinal ganglion cells

Yuwei Cui;Yanbin V. Wang;Silvia J. H. Park;Jonathan B. Demb;Daniel A. Butts;

10.1101/064592 — Neuroscience — Posted on 2016-07-19

187 Identification of a novel putative interaction partner of the nucleoporin ALADIN

Ramona Jühlen;Dana Landgraf;Angela Huebner;Katrin Koehler;

10.1101/064766 — Cell Biology — Posted on 2016-07-19

188 CLIMB (the Cloud Infrastructure for Microbial Bioinformatics): an online resource for the medical microbiology community

Thomas Richard Connor;Nicholas James Loman;Simon Thompson;Andy Smith;Joel Southgate;Radoslaw Poplawski;Matthew J Bull;Emily Richardson;Matthew Ismail;Simon Elwood-Thompson;Christine Kitchen;Martyn Guest;Marius Bakke;Sam K Sheppard;Mark J Pallen;

10.1101/064451 — Bioinformatics — Posted on 2016-07-19

189 Relaxed selection during a recent human expansion

Stephan Peischl;Isabelle Dupanloup;Adrien Foucal;Michèle Jomphe;Vanessa Bruat;Jean-Cristophe Grenier;Alexandre Gouy;Elias Gbeha;Lars Bosshard;Elodie Hip-Ki;Mawussé Agbessi;Alan Hodgkinson;Hélène Vézina;Philip Awadalla;Laurent Excoffier;

10.1101/064691 — Genomics — Posted on 2016-07-21

190 Relaxed selection during a recent human expansion

10.1101/064691 — Genomics — Posted on 2016-07-19

191 Local chromosome context is a major determinant of crossover pathway biochemistry during budding yeast meiosis

Darpan Medhi;Alastair S.H. Goldman;Michael Lichten;

10.1101/064519 — Genetics — Posted on 2016-07-18

192 Theoretical and Empirical Support for Bilateral Decrementation

Idan Solon;

10.1101/064493 — Evolutionary Biology — Posted on 2016-07-18

193 Resource ratios determine nutrient limitation of primary productivity in the ocean

George Isaac Hagstrom;Simon A Levin;Adam Martiny;

10.1101/064543 — Ecology — Posted on 2016-07-18

194 The Origin of Coupled Chloride and Proton Transport in a Cl-/H+ Antiporter

Sangyun Lee;Heather B. Mayes;Jessica M. J. Swanson;Gregory A Voth;

10.1101/064527 — Biochemistry — Posted on 2016-07-18

195 The Strehler-Mildvan correlation is nothing but a fitting artifact

Andrei E. Tarkhov;Leonid I. Menshikov;Peter O. Fedichev;

10.1101/064477 — Systems Biology — Posted on 2016-07-18

196 Neuronal control of the fingertips is socially configured in touchscreen smartphone users

Arko Ghosh;Myriam Balerna;

10.1101/064485 — Neuroscience — Posted on 2016-07-18

197 The haplotype-resolved genome sequence of hexaploid Ipomoea batatas reveals its evolutionary history

Jun Yang;M-Hossein Moeinzadeh;Heiner Kuhl;Johannes Helmuth;Peng Xiao;Guiling Liu;Jianli Zheng;Zhe Sun;Weijuan Fan;Gaifang Deng;Hongxia Wang;Fenhong Hu;Alisdair R Fernie;Bernd Timmermann;Peng Zhang;Martin Vingron;

10.1101/064428 — Genomics — Posted on 2016-07-18

198 Y chromosome and mitochondrial DNA haplogroups across behavioural traits in children from the general population

Laurence J Howe;Mesut Erzurumluoglu;George Davey-Smith;Santiago Rodriguez;Evie Stergiakouli;

10.1101/064444 — Genetics — Posted on 2016-07-18

199 Calculating biological module enrichment or depletion and visualizing data on large-scale molecular maps with ACSNMineR and RNaviCell R packages

Paul Deveau;Emmanuel Barillot;Valentina Boeva;Andrei Zinovyev;Eric Bonnet;

10.1101/064469 — Bioinformatics — Posted on 2016-07-22

200 Calculating biological module enrichment or depletion and visualizing data on large-scale molecular maps with ACSNMineR and RNaviCell R packages

Paul Deveau;Emmanuel Barillot;Valentina Boeva;Andrei Zinovyev;Eric Bonnet;

10.1101/064469 — Bioinformatics — Posted on 2016-07-18

201 MICROWAVE MUTAGENESIS OF BREVIBACILLUS PARABREVIS FOR ENHANCED CELLULASE PRODUCTION, AND INVESTIGATION ON THERMOSTABILITY OF THIS CELLULASE

Pinakin Khambhala;Purva Paliwal;Vijay Kothari;

10.1101/064410 — Microbiology — Posted on 2016-07-18

202 FEELnc: A tool for Long non-coding RNAs annotation and its application to the dog transcriptome

Valentin Wucher;Fabrice Legeai;Benoit Hedan;Guillaume Rizk;Laetitia Lagoutte;Tosso Leeb;Vidhya Jagannathan;Edouard Cadieu;Audrey David;Hannes Lohi;Susanna Cirera;Merete Fredholm;Nadine Botherel;Peter Leegwater;Celine Le Beguec;Hille Fieten;Cecilia Johansson;Jeremy Johnsson;Jessica Alifoldi;Catherine Andre;Kerstin Lindblad-Toh;Christophe Hitte;Thomas Derrien;

10.1101/064436 — Bioinformatics — Posted on 2016-07-18

203 Functional Cliques in Developmentally Correlated Neural Networks

Stefano Luccioli;Ari Barzilai;Eshel Ben-Jacob;Paolo Bonifazi;Alessandro Torcini;

10.1101/064147 — Neuroscience — Posted on 2016-07-18

204 A Multi-Scale Computational Model of the effects of TMS on Motor Cortex

Hyeon Seo;Natalie Schaworonkow;Sung Chan Jun;Jochen Triesch;

10.1101/064337 — Neuroscience — Posted on 2016-07-18

205 Effects of tDCS on motor learning and memory formation: a consensus and critical position paper

Ethan R Buch;Emiliano Santarnecchi;Andrea Antal;Jan Born;Pablo A Celnik;Joseph Classen;Christian Gerloff;Mark Hallett;Friedhelm C Hummel;Michael A Nitsche;Alvaro Pascual-Leone;Walter J Paulus;Janine Reis;Edwin M Robertson;John C Rothwell;Marco Sandrini;Heidi M Schambra;Eric M Wassermann;Ulf Ziemann;Leonardo G Cohen;

10.1101/064204 — Neuroscience — Posted on 2016-07-18

206 Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition

Berith E Knudsen;Lasse Bergmark;Patrick Munk;Oksana Lukjancenko;Anders Prieme;Frank M Aarestrup;Sunje J Pamp;

10.1101/064394 — Microbiology — Posted on 2016-07-18

207 Single-molecule sequencing and conformational capture enable de novo mammalian reference genomes

Derek M Bickhart;Benjamin D Rosen;Sergey Koren;Brian L Sayre;Alex R Hastie;Saki Chan;Joyce Lee;Ernest T Lam;Ivan Liachko;Shawn T Sullivan;Joshua N Burton;Heather J Huson;Christy M Kelley;Jana L Hutchison;Yang Zhou;Jiajie Sun;Alessandra Crisa;F. Abel Ponce de Leon;John C Schwartz;John A Hammond;Geoffrey C Waldbieser;Steven G Schroeder;George E Liu;Maitreya J Dunham;Jay Shendure;Tad S Sonstegard;Adam M Phillippy;Curtis P Van Tassell;Timothy P.L. Smith;

10.1101/064352 — Genomics — Posted on 2016-07-18

208 Transition from environmental to partial genetic sex determination in Daphnia through the evolution of a female-determining incipient W-chromosome

Celine M. O. Reisser;Dominique Fasel;Evelin Hurlimann;Marinela Dukic;Cathy Haag-Liautard;Virginie Thuillier;Yan Galimov;Christoph R Haag;

10.1101/064311 — — Posted on 2016-07-27

209 Transition from environmental to partial genetic sex determination in Daphnia through the evolution of a female-determining incipient W-chromosome

Celine M. O. Reisser;Dominique Fasel;Evelin Hurlimann;Marinela Dukic;Cathy Haag-Liautard;Virginie Thuillier;Yan Galimov;Christoph R Haag;

10.1101/064311 — — Posted on 2016-07-18

210 Editing of the urease gene by CRISPR-Cas in the diatom Thalassiosira pseudonana

Amanda Hopes;Vladimir Nekrasov;Sophien Kamoun;Thomas Mock;

10.1101/062026 — Genomics — Posted on 2016-07-18

211 Architectures of a lipid transport systems for the bacterial outer membrane

Damian C Ekiert;Gira Bhabha;Garrett Greenan;Sergey Ovchinnikov;Jeffery S Cox;Ronald D Vale;

10.1101/064360 — Biochemistry — Posted on 2016-07-18

212 Specific effect of dopamine partial agonist on counterfactual learning: evidence from Gilles de la Tourette syndrome

Alexandre Salvador;Yulia Worbe;Cecile Delorme;Giorgio Coricelli;Raphael Gaillard;Trevor W Robbins;Andreas Hartmann;Stefano Palminteri;

10.1101/064345 — Neuroscience — Posted on 2016-07-17

213 The mitotic spindle in the one-cell C. elegans embryo is positioned with high precision and stability

Jacques Pecreaux;Stephanie Redemann;Zahraa Alayan;Benjamin Mercat;Sylvain Pastezeur;Carlos Garzon Coral;Anthony A Hyman;Jonathon Howard;

10.1101/063529 — Biophysics — Posted on 2016-07-17

214 Assessment of single cell RNA-seq normalization methods

Bo Ding;Lina Zheng;Wei Wang;

10.1101/064329 — Bioinformatics — Posted on 2016-07-17

215 Comparison of semi-automated hippocampal subfield segmentation methods in a pediatric sample

Margaret L Schlichting;Michael L Mack;Katharine F Guarino;Alison R Preston;

10.1101/064303 — Neuroscience — Posted on 2016-07-17

216 Stable C. elegans chromatin domains separate broadly expressed and developmentally regulated genes

Kenneth J Evans;Ni Huang;Przemyslaw Stempor;Michael A Chesney;Thomas A Down;Julie Ahringer;

10.1101/063990 — Genomics — Posted on 2016-07-17

217 H&E-stained Whole Slide Deep Learning Predicts SPOP Mutation State in Prostate Cancer

Andrew J Schaumberg;Mark A Rubin;Thomas J Fuchs;

10.1101/064279 — Pathology — Posted on 2016-07-21

218 H&E-stained Whole Slide Deep Learning Predicts SPOP Mutation State in Prostate Cancer

Andrew J Schaumberg;Mark A Rubin;Thomas J Fuchs;

10.1101/064279 — Pathology — Posted on 2016-07-18

219 H&E-stained Whole Slide Deep Learning Predicts SPOP Mutation State in Prostate Cancer

Andrew J Schaumberg;Mark A Rubin;Thomas J Fuchs;

10.1101/064279 — Pathology — Posted on 2016-07-18

220 H&E-stained Whole Slide Deep Learning Predicts SPOP Mutation State in Prostate Cancer

Andrew J Schaumberg;Mark A Rubin;Thomas J Fuchs;

10.1101/064279 — Pathology — Posted on 2016-07-17

221 Bayesian model reveals latent atrophy factors with dissociable cognitive trajectories in Alzheimer’s disease

Xiuming Zhang;Elizabeth Mormino;Nanbo Sun;Reisa Sperling;Mert Sabuncu;B.T. Thomas Yeo;Alzheimer's Disease Neuroimaging Initiative;

10.1101/064295 — Neuroscience — Posted on 2016-07-17

222 Revealing neuro-computational mechanisms of reinforcement learning and decision-making with the hBayesDM package

Woo-Young Ahn;Nathaniel Haines;Lei Zhang;

10.1101/064287 — Neuroscience — Posted on 2016-07-17

223 Revealing neuro-computational mechanisms of reinforcement learning and decision-making with the hBayesDM package

Woo-Young Ahn;Nathaniel Haines;Lei Zhang;

10.1101/064287 — Neuroscience — Posted on 2016-07-16

224 Transport efficiency of membrane-anchored kinesin-1 motors depends on motor density and diffusivity

Stefan Diez;Rahul Grover;Janine Fischer;Friedrich Schwarz;Wilhelm J Walter;Petra Schwille;

10.1101/064246 — Biophysics — Posted on 2016-07-15

225 Comparative phylogenetic analysis of bacterial associates in Pyrrhocoroidea and evidence for ancient and persistent environmental symbiont reacquisition in Largidae (Hemiptera: Heteroptera).

Eric Robert Lucien Gordon;Quinn S McFrederick;Christiane Weirauch;

10.1101/064022 — Microbiology — Posted on 2016-07-15

226 Nonadaptive Radiation: Pervasive diet specialization by drift in scale insects?

Nate B Hardy;Daniel A Peterson;Benjamin B Normark;

10.1101/064220 — Evolutionary Biology — Posted on 2016-07-15

227 A hidden Markov model approach for simultaneously estimating local ancestry and admixture time using next generation sequence data in samples of arbitrary ploidy

Russell Corbett-Detig;Rasmus Nielsen;

10.1101/064238 — Evolutionary Biology — Posted on 2016-07-15

228 Antibody-Based Affinity Cryo-Electron Microscopy at 2.6 Å Resolution

Guimei Yu;Kunpeng Li;Pengwei Huang;Xi Jiang;Wen Jiang;

10.1101/064188 — Biophysics — Posted on 2016-07-15

229 An Empirical Biomarker-based Calculator for Autosomal Recessive Polycystic Kidney Disease The Nieto-Narayan Formula

Jake A Nieto;Michael A Yamin;Itzhak D. Goldberg;Prakash Narayan;

10.1101/064139 — Bioinformatics — Posted on 2016-07-26

230 An Empirical Biomarker-based Calculator for Autosomal Recessive Polycystic Kidney Disease The Nieto-Narayan Formula

Jake A Nieto;Michael A Yamin;Itzhak D. Goldberg;Prakash Narayan;

10.1101/064139 — Bioinformatics — Posted on 2016-07-15

231 Accelerating computational Bayesian inference for stochastic biochemical reaction network models using multilevel Monte Carlo sampling

David J Warne;Ruth E Baker;Matthew J Simpson;

10.1101/064170 — Systems Biology — Posted on 2016-07-15

232 3D sorghum reconstructions from depth images enable identification of quantitative trait loci regulating shoot architecture

Ryan F. McCormick;Sandra K. Truong;John E. Mullet;

10.1101/062174 — Plant Biology — Posted on 2016-07-15

233 Is the Statistic Value All We Should Care about in Neuroimaging?

Gang Chen;Paul A Taylor;Robert W Cox;

10.1101/064212 — Neuroscience — Posted on 2016-07-22

234 Is the Statistic Value All We Should Care about in Neuroimaging?

Gang Chen;Paul A Taylor;Robert W Cox;

10.1101/064212 — Neuroscience — Posted on 2016-07-15

235 Functional genetic characterization by CRISPR-Cas9 of two enhancers of FOXP2 in a child with speech and language impairment

Raul Torres-Ruiz;Antonio Benitez-Burraco;Marta Martinez-Lage;Sandra Rodriguez-Perales;Paloma Garcia-Bellido;

10.1101/064196 — Molecular Biology — Posted on 2016-07-16

236 Functional genetic characterization by CRISPR-Cas9 of two enhancers of FOXP2 in a child with speech and language impairment

Raul Torres-Ruiz;Antonio Benitez-Burraco;Marta Martinez-Lage;Sandra Rodriguez-Perales;Paloma Garcia-Bellido;

10.1101/064196 — Molecular Biology — Posted on 2016-07-15

237 The Forest, the Trees, and the Phylo-diversity Jungle

Florent Mazel;Caroline Tucker;Marc Cadotte;Silvia Carvalho;Jonathan Davies;Suzanne Fritz;Rich Grenyer;Matthew Helmus;Arne Mooers;Sandrine Pavoine;Oliver Purschke;Dan Rosauer;Marten Winter;

10.1101/063461 — Ecology — Posted on 2016-07-15

238 Influence of rotational nucleosome positioning on transcription start site selection in animals promoters

Rene Dreos;Giovanna Ambrosini;Philipp Bucher;

10.1101/064113 — Bioinformatics — Posted on 2016-07-15

239 Metabolic complementation in bacterial communities: necessary conditions and optimality

Matteo Mori;Miguel Ponce-de-Leon;Juli Pereto;Francisco Montero Montero;

10.1101/064121 — Systems Biology — Posted on 2016-07-15

240 Neural signatures of value comparison in human cingulate cortex during decisions requiring an effort-reward trade-off

Miriam C Klein-Flugge;Steven W Kennerley;Karl Friston;Sven Bestmann;

10.1101/064105 — Neuroscience — Posted on 2016-07-15

241 Single cell transcriptomics, mega-phylogeny and the genetic basis of morphological innovations in Rhizaria

Anders K Krabberoed;Russell J. S. Orr;Jon Braate;Tom Kristensen;Kjell R. Bjoerklund;Kamran Shalchian-Tabrizi;

10.1101/064030 — Evolutionary Biology — Posted on 2016-07-15

242 Temperature determines Zika, dengue and chikungunya transmission potential in the Americas

Erin Mordecai;Jeremy Cohen;Michelle V Evans;Prithvi Gudapati;Leah R Johnson;Kerri Miazgowicz;Courtney C Murdock;Jason R Rohr;Sadie J Ryan;Van Savage;Marta Shocket;Anna Stewart Ibarra;Matthew B Thomas;Daniel P Weikel;

10.1101/063735 — Ecology — Posted on 2016-07-15

243 The Influence of Canalization on the Robustness of Boolean Networks

Claus Kadelka;Jack Kuipers;Reinhard Laubenbacher;

10.1101/064089 — Biophysics — Posted on 2016-07-15

244 Falco: A quick and flexible single-cell RNA-seq processing framework on the cloud

Andrian Yang;Michael Troup;Joshua W.K. Ho;

10.1101/064006 — Bioinformatics — Posted on 2016-07-15

245 MIGS: Methylation Interpolated Gene Signatures Determine Associations Between Differential Methylation and Gene Expression

Christopher E Schlosberg;Nathan D VanderKraats;John R Edwards;

10.1101/063941 — Bioinformatics — Posted on 2016-07-15

246 The metabolic profile of lag and exponential phases of Saccharomyces cerevisiae growth changes continuously

Rafael N. Bento;Miguel A. Rendas;Valdir A.R. Semedo;Carlos E.S. Bernardes;Manuel E.M. Piedade;Fernando Antunes;

10.1101/063909 — Biochemistry — Posted on 2016-07-15

247 Zika virus may not be alone: proteomics associates a bovine-like viral diarrhea virus to microcephaly

Fabio CS Nogueira;Erika Velasquez;Adriana SO Melo;Gilberto B Domont;

10.1101/062596 — Biochemistry — Posted on 2016-07-15

248 Distance Sampling in R

David Lawrence Miller;Eric Rexstad;Len Thomas;Laura Marshall;Jeffrey Laake;

10.1101/063891 — Ecology — Posted on 2016-07-14

249 The Missing Link: Predicting Connectomes from Noisy and Partially Observed Tract Tracing Data

Max Hinne;Annet Meijers;Rembrandt Bakker;Paul H.E. Tiesinga;Morten Mørup;Marcel A.J. van Gerven;

10.1101/063867 — Neuroscience — Posted on 2016-07-14

250 Recent Outbreaks of Shigellosis in California Caused by Two Distinct Populations of Shigella sonnei With Increased Virulence or Fluoroquinolone Resistance

Varvara K. Kozyreva;Guillaume Jospin;Alex Greninger;James P. Watt;Jonathan A. Eisen;Vishnu Chaturvedi;

10.1101/063818 — Microbiology — Posted on 2016-07-14

251 Age-dependent changes in mean and variance of gene expression across tissues in a twin cohort

Ana Vinuela;Andrew Anand Brown;Alfonso Buil;Pei-Chien Tsai;Matthew N Davies;Jordana Tzenova Bell;Emmanouil Dermitzakis;Timothy Spector;Kerrin Small;

10.1101/063883 — Genomics — Posted on 2016-07-14

252 Colonization and diversification of aquatic insects on three Macaronesian archipelagos using 59 nuclear loci derived from a draft genome

Sereina Rutschmann;Harald Detering;Sabrina Simon;David H Funk;Jean-Luc Gattolliat;Samantha J Hughes;Pedro M Raposeiro;Rob DeSalle;Michel Sartori;Michael T Monaghan;

10.1101/063859 — Evolutionary Biology — Posted on 2016-07-14

253 Colonization and diversification of aquatic insects on three Macaronesian archipelagos using 59 nuclear loci derived from a draft genome

Sereina Rutschmann;Harald Detering;Sabrina Simon;David H Funk;Jean-Luc Gattolliat;Samantha J Hughes;Pedro M Raposeiro;Rob DeSalle;Michel Sartori;Michael T Monaghan;

10.1101/063859 — Evolutionary Biology — Posted on 2016-07-14

254 Multi-rate Poisson Tree Processes for single-locus species delimitation under Maximum Likelihood and Markov Chain Monte Carlo.

Paschalia Kapli;Sarah Lutteropp;Jiajie Zhang;Kassian Kobert;Pavlos Pavlidis;Alexandros Stamatakis;Tomas Flouri;

10.1101/063875 — Bioinformatics — Posted on 2016-07-14

255 Measurements of translation initiation from all 64 codons in E. coli

Ariel Hecht;Jeff Glasgow;Paul R. Jaschke;Lukmaan Bawazer;Matthew S. Munson;Jennifer Cochran;Drew Endy;Marc Salit;

10.1101/063800 — Synthetic Biology — Posted on 2016-07-14

256 The queenslandensis and the type form of the dengue fever mosquito (Aedes aegypti L.) are genomically indistinguishable

Gordana Rašić;Igor Filipović;Ashley G Callahan;Darren Stanford;Abigail Chan;Sai Gek Lam-Phua;Cheong Huat Tan;Ary Anthony Hoffmann;

10.1101/063792 — Genomics — Posted on 2016-07-14

257 Killing by Type VI secretion drives clonal phase separation and the evolution of cooperation

Luke McNally;Eryn Bernardy;Jacob Thomas;Arben Kalziqi;Jennifer T Pentz;Sam Brown;Brian Hammer;Peter Yunker;William Ratcliff;

10.1101/063487 — Evolutionary Biology — Posted on 2016-07-14

258 Precision of readout at the hunchback gene

Jonathan Desponds;Huy Tran;Teresa Ferraro;Tanguy Lucas;Carmina Perez Romero;Aurelien Guillou;Cecile Fradin;Mathieu Coppey;Nathalie Dostatni;Aleksandra M Walczak;

10.1101/063784 — Developmental Biology — Posted on 2016-07-14

259 Biophysical assay for tethered signaling reactions reveals tether-controlled activity for the phosphatase SHP-1

Jesse Goyette;Citlali Solis Salas;Nicola Coker Gordon;Marcus Bridge;Samuel I Isaacson;Jun Allard;Omer Dushek;

10.1101/063776 — Biophysics — Posted on 2016-07-14

260 Changeover from signalling to energy-provisioning lipids during transition from colostrum to mature milk in the giant panda (Ailuropoda melanoleuca)

Tong Zhang;David G. Watson;Rong Zhang;Rong Hou;Kati Loeffler;Malcolm W. Kennedy;

10.1101/063701 — Zoology — Posted on 2016-07-13

261 Modelling tree growth taking into account carbon source and sink limitations

Amaury Hayat;Andrew J Hacket-Pain;Hans Pretzsch;Tim Tito Rademacher;Andrew D Friend;

10.1101/063594 — Plant Biology — Posted on 2016-07-13

262 Beyond spike-timing-dependent plasticity: a computational study of plasticity gradients across basal dendrites.

Jacopo Bono;Claudia Clopath;

10.1101/063719 — Neuroscience — Posted on 2016-07-13

263 Persistent activation of interlinked Th2-airway epithelial gene networks in sputum-derived cells from aeroallergen-sensitized symptomatic atopic asthmatics

Anya C Jones;Niamh M Troy;Elisha White;Elysia M Hollams;Alexander M Gout;Kak-Ming Ling;Anthony Kicic;Peter D Sly;Patrick G Holt;Graham L Hall;Anthony Bosco;

10.1101/063602 — Immunology — Posted on 2016-07-13

264 A massively parallel strategy for STR marker development, capture, and genotyping

Logan Kistler;Stephen M Johnson;Mitchell T Irwin;Edward E Louis;Aakrosh Ratan;George H Perry;

10.1101/063727 — Genomics — Posted on 2016-07-19

265 A massively parallel strategy for STR marker development, capture, and genotyping

Logan Kistler;Stephen M Johnson;Mitchell T Irwin;Edward E Louis;Aakrosh Ratan;George H Perry;

10.1101/063727 — Genomics — Posted on 2016-07-13

266 Sex differences in disease genetics

William Gilks;

10.1101/063651 — Genetics — Posted on 2016-07-13

267 Molecular genetic aetiology of general cognitive function is enriched in evolutionarily conserved regions

William David Hill;Gail Davies;Sarah E Harris;Saskia P Hagenaars;David Liewald;Lars Penke;Catherine R Gale;Ian Deary;

10.1101/063636 — Genetics — Posted on 2016-07-21

268 Molecular genetic aetiology of general cognitive function is enriched in evolutionarily conserved regions

William David Hill;Gail Davies;Sarah E Harris;Saskia P Hagenaars;David Liewald;Lars Penke;Catherine R Gale;Ian Deary;

10.1101/063636 — Genetics — Posted on 2016-07-13

269 Variation in mutation rates among human populations

Iain Mathieson;David E. Reich;

10.1101/063578 — Genetics — Posted on 2016-07-13

270 Ancient coexistence of norepinephrine, tyramine, and octopamine signaling in bilaterians

Philipp Bauknecht;Gaspar Jekely;

10.1101/063743 — Evolutionary Biology — Posted on 2016-07-13

271 A correlation between Long noncoding RNA and unpaired DNA silencing in Drosophila

Utpal Bhadra;Manika Pal Bhadra;Indira Bag;Sreerangam NCVL Pusphavalli;Avadhesha Surolia;

10.1101/063677 — Developmental Biology — Posted on 2016-07-13

272 R-spondin1 regulates muscle progenitor cell fusion through control of antagonist Wnt signaling pathways

Floriane Lacour;Elsa Vezin;Florian Bentzinger;Marie-Claude Sincennes;Michael A Rudnicki;Robert D Mitchell;Ketan Patel;Marie-Christine Chaboissier;Anne-Amandine Chassot;Fabien Le Grand;

10.1101/063669 — Cell Biology — Posted on 2016-07-13

273 ADPriboDB: The Database of ADP-ribosylated Proteins

Christina Vivelo;Ricky Wat;Charul Agrawal;Hui Yi Tee;Anthony Leung;

10.1101/063768 — Bioinformatics — Posted on 2016-07-13

274 Inference of epistatic effects and the development of drug resistance in HIV-1 protease

William F Flynn;Allan Haldane;Bruce E Torbett;Ronald M Levy;

10.1101/063750 — Bioinformatics — Posted on 2016-07-13

275 Strategic adjustment of parental care: life-history trade-offs and the role of glucocorticoids

Çağlar Akçay;Ádám Z. Lendvai;Mark Stanback;Mark Hausmann;Ignacio T. Moore;Fran Bonier;

10.1101/063313 — Animal Behavior and Cognition — Posted on 2016-07-13

276 Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments

Didi He;Sam Hughes;Sally Vanden-Hehir;Atanas Georgiev;Kirsten Altenbach;Emma Tarrant;C Logan Mackay;Kevin J Waldron;David J Clarke;Jon Marles-Wright;

10.1101/063495 — Biochemistry — Posted on 2016-07-13

277 A Thousand Fly Genomes: An Expanded Drosophila Genome Nexus

Justin B Lack;Jeremy D Lange;Alison B Tang;Russell B Corbett-Detig;John E Pool;

10.1101/063537 — Genomics — Posted on 2016-07-12

278 Parallel Evolution of Cold Tolerance Within Drosophila melanogaster

John E Pool;Dylan T Braun;Justin B Lack;

10.1101/063545 — Evolutionary Biology — Posted on 2016-07-12

279 Phylogenetic scale in ecology and evolution