Channel:  The Howard Hughes Medical Institute (HHMI)

2,120 Articles

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pipemake: A pipeline creation tool using Snakemake for reproducible analysis of biological datasets
Webb, A. E., Wolf, S. W., Traniello, I. M., Kocher, S. D.
10.1101/2024.12.20.629758 — Posted: 2024-12-24
The cytosolic cysteinyl-tRNA synthetase is capable of regulating ATF4 translation independent of eIF2α phosphorylation state
Xu, A. E., Weissman, J. S.
10.1101/2024.12.23.630120 — Posted: 2024-12-23
Probing mechanical selection in diverse eukaryotic genomes through accurate prediction of 3D DNA mechanics
Park, J., Prokopchuk, G., Popchock, A. R., Hao, J., Liao, T.-W., Yan, S., Hedman, D. J., Larson, J. D., Walther, B., Becker, N. A., Basu, A., Maher, L. J., Wheeler, R. J., Asbury, C. L., Biggins, S., Lukes, J., Ha, T.
10.1101/2024.12.22.629997 — Posted: 2024-12-23
In vivo multiplex imaging of dynamic neurochemical networks with designed far-red dopamine sensors
Zheng, Y., Cai, R., Wang, K., Zhang, J., Zhuo, Y., Dong, H., Zhang, Y., Wang, Y., Deng, F., Ji, E., Cui, Y., Fang, S., Zhang, X., zhang, k., Wang, J., Li, G., Miao, X., Wang, Z., Yang, Y., Li, S., Grimm, J., Johnsson, K., Schreiter, E. R., Lavis, L., Chen, Z., Mu, Y., Li, Y.
10.1101/2024.12.22.629999 — Posted: 2024-12-23
Nucleosome Spacing Can Fine-Tune Higher Order Chromatin Assembly
Chen, L., Maristany, M. J., Farr, S. E., Luo, J., Gibson, B. A., Doolittle, L. K., Rene Espinosa, J., Huertas, J., Redding, S., Collepardo-Guevara, R., Rosen, M. K.
10.1101/2024.12.23.627571 — Posted: 2024-12-23
Targeted mutagenesis of specific genomic DNA sequences in animals for the in vivo generation of variant libraries
Falo-Sanjuan, J., Diaz-Tirado, Y., Turner, M. A., Rourke, O., Davis, J., Medrano, C., Haines, J., McKenna, J., Karshenas, A., Eisen, M. B., Garcia, H. G.
10.1101/2024.06.10.598328 — Posted: 2024-12-22
CESA: Cross-species Epitope Sequence Analysis for discovery of existing antibodies useful for phospho-specific protein detection in model species
Hu, Y., Gao, C., McKenna, W., Xia, B., Ariss, M., Mohr, S., Perrimon, N.
10.1101/2024.12.20.629730 — Posted: 2024-12-22
Acoustic tumor paint for real-time imaging, surgical guidance and recurrence monitoring of brain tumors with ultrasound
Rabut, C., Daghlian, G. H., Barturen-Larrea, P., Li, H. R., Vorder Bruegge, R., Jones, R. M., Malounda, D., Pinton, G. F., Shapiro, M. G.
10.1101/2024.12.22.629782 — Posted: 2024-12-22
OrthoHMM: Improved Inference of Ortholog Groups using Hidden Markov Models
Steenwyk, J. L., Buida, T. J., Rokas, A., King, N.
10.1101/2024.12.07.627370 — Posted: 2024-12-21
Computational design of bifaceted protein nanomaterials
Rankovic, S., Carr, K. D., Decarreau, J., Skotheim, R., Kibler, R. D., Ols, S., Lee, S., Chun, J.-H., Tooley, M. R., Dauparas, J., Eisenach, H. E., Gloegl, M., Weidle, C., Borst, A. J., Baker, D., King, N. P.
10.1101/2024.10.18.619149 — Posted: 2024-12-21

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