Channel : DREAM

Reverse-engineering human olfactory perception from chemical features of odor molecules
Keller, A., Gerkin, R. C., Guan, Y., Dhurandhar, A., Turu, G., Szalai, B., Mainland, J. D., Ihara, Y., Yu, C. W., Wolfinger, R., Vens, C., Schietgat, L., De Grave, K., Norel, R., DREAM Olfaction Prediction Challenge Consortium, , Stolovitzky, G., Cecchi, G., Vosshall, L. B., Meyer, P.
10.1101/082495 — Posted: 2016-10-21
A community-based collaboration to build prediction models for short-term discontinuation of docetaxel in metastatic castration-resistant prostate cancer patients
Seyednasrollah, F., Koestler, D. C., Wang, T., Piccolo, S. R., Vega, R., Greiner, R., Fuchs, C., Gofer, E., Kumar, L., Wolfinger, R. D., Kanigel Winner, K., Bare, C., Neto, E. C., Yu, T., Shen, L., Abdallah, K., Norman, T., Stolovitzky, G., PCC-DREAM Community, , Soule, H., Sweeney, C. J., Ryan, C. J., Scher, H. I., Sartor, O., Elo, L. L., Zhou, F. L., Guinney, J., Costello, J. C.
10.1101/087809 — Posted: 2016-11-15
Germline Contamination and Leakage in Whole Genome Somatic Single Nucleotide Variant Detection
Sendorek, D. H., Caloian, C., Ellrott, K., Bare, J. C., Yamaguchi, T. N., Ewing, A. D., Houlahan, K. E., Norman, T. C., Margolin, A. A., Stuart, J. M., Boutros, P. C.
10.1101/204370 — Posted: 2017-10-17
Valection: Design Optimization for Validation and Verification Studies
Cooper, C. I., Yao, D., Sendorek, D. H., Yamaguchi, T. N., P'ng, C., Houlahan, K. E., Caloian, C., Fraser, M., SMC-DNA Challenge Participants, , Ellrott, K., Margolin, A. A., Bristow, R. G., Stuart, J. M., Boutros, P. C.
10.1101/254839 — Posted: 2018-01-28
Community assessment of cancer drug combination screens identifies strategies for synergy prediction
Menden, M. P., Wang, D., Guan, Y., Mason, M., Szalai, B., Bulusu, K. C., Yu, T., Kang, J., Jeon, M., Wolfinger, R., Nguyen, T., Zaslavskiy, M., AstraZeneca-Sanger Drug Combination DREAM Consorti, , Jang, I. S., Ghazoui, Z., Ahsen, M. E., Vogel, R., Chaibub Neto, E., Norman, T., Tang, E. K., Garnett, M. J., Di Veroli, G., Fawell, S., Stolovitzky, G., Guinney, J., Dry, J. R., Saez-Rodriguez, J.
10.1101/200451 — Posted: 2017-10-09
Stratification of amyotrophic lateral sclerosis patients: a crowdsourcing approach
Kueffner, R., Zach, N., Bronfeld, M., Norel, R., Atassi, N., Balagurusamy, V., di Camillo, B., Chio, A., Cudkowicz, M., Dillenberger, D., Garcia-Garcia, J., Hardiman, O., Hoff, B., Knight, J., Leitner, M. L., Li, G., Mangravite, L., Norman, T., Wang, L., The ALS Stratification Consortium, , Xiao, J., Fang, W.-C., Peng, J., Stolovitzky, G.
10.1101/294231 — Posted: 2018-04-05
A crowdsourced analysis to identify ab initio molecular signatures predictive of susceptibility to viral infection
Fourati, S., Talla, A., Mahmoudian, M., Burkhart, J. G., Klen, R., Henao, R., Aydin, Z., Yeung, K. Y., Ahsen, M. E., Almugbel, R., Jahandideh, S., Liang, X., Nordling, T. E. M., Shiga, M., Stanescu, A., Vogel, R., The Respiratory Viral DREAM Challenge Consortium, , Pandey, G., Chiu, C., McClain, M. T., Woods, C. W., Ginsburg, G. S., Elo, L. L., Tsalik, E. L., Mangravite, L. M., Sieberts, S. K.
10.1101/311696 — Posted: 2018-04-30
Identifying biomarkers of anti-cancer drug synergy using multi-task learning
Aben, N., de Ruiter, J., Bosdriesz, E., Kim, Y., Bounova, G., Vis, D., Wessels, L., Michaut, M.
10.1101/243568 — Posted: 2018-01-05
Combining accurate tumour genome simulation with crowd sourcing to benchmark somatic structural variant detection
Lee, A. Y.-W., Ewing, A. D., Ellrott, K., Hu, Y., Houlahan, K. E., Bare, J. C., Espiritu, S. M. G., Huang, V., Dang, K., Chong, Z., Caloian, C., Yamaguchi, T. N., ICGC-TCGA DREAM Somatic Mutation Calling Challenge, , Kellen, M. R., Chen, K., Norman, T. C., Friend, S. H., Guinney, J., Stolovitzky, G., Haussler, D., Margolin, A. A., Stuart, J. M., Boutros, P. C.
10.1101/224733 — Posted: 2017-11-25
Open Community Challenge Reveals Molecular Network Modules with Key Roles in Diseases
Choobdar, S., Ahsen, M. E., Crawford, J., Tomasoni, M., Lamparter, D., Lin, J., Hescott, B., Hu, X., Mercer, J., Natoli, T., Narayan, R., The DREAM Module Identification Challenge Consortium, , Subramanian, A., Stolovitzky, G., Kutalik, Z., Lage, K., Slonim, D. K., Saez-Rodriguez, J., Cowen, L. J., Bergmann, S., Marbach, D.
10.1101/265553 — Posted: 2018-02-15

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