Channel: University of California, San Diego

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Diego.

4212 Articles

Characterizing Behavioral Dynamics in Bipolar Disorder with Computational Ethology

Zhang, Z., Chou, C. K., Rosberg, H., Perry, W., Young, J. W., Minassian, A., Mishne, G., Aoi, M.

10.1101/2024.11.14.24317348 — Posted: 2024-11-15

ecPath detects ecDNA in tumors from histopathology images

Choudhury, M., Liu, L., Yadav, A., Chapman, O. S., Ahmadi, Z., Younis, R., Sharma, C., Goel, N., Sridhar, S., Kenkre, R., Dutta, A., Wang, S., Shulman, E., Dhruba, S. R., Tai, H. D., Tharp, K., Paul, M., Malicki, D., Yip, K., Ruppin, E., Chavez, L., Sinha, S.

10.1101/2024.11.13.623494 — Posted: 2024-11-15

A reconstruction of the mammalian secretory pathway identifies mechanisms regulating antibody production

Masson, H., Tat, J., Di Giusto, P., Antonakoudis, A., Shamie, I., Baghdassarian, H., Samoudi, M., Robinson, C. M., Kuo, C.-C., Koga, N., Singh, S., Gezalyan, A., Li, Z., Movsessian, A., Richelle, A., Lewis, N. E.

10.1101/2024.11.14.623668 — Posted: 2024-11-15

UFMTrack: Under-Flow Migration Tracker enabling analysis of the entire multi-step immune cell extravasation cascade across the blood-brain barrier in microfluidic devices

Vladymyrov, M., Marchetti, L., Aydin, S., Soldati, S. G. N., Mossu, A., Pal, A., Gueissaz, L., Ariga, A., Engelhardt, B.

10.1101/2023.01.04.522827 — Posted: 2024-11-15

Novel CRITR-seq approach reveals influenza transcription is modulated by NELF and is a key event precipitating an interferon response

Vicary, A. C., Jordan, S. N. Z., Mendes, M., Swaminath, S., Castro, L. K., Porter, J. S., Russell, A. B.

10.1101/2024.11.14.623683 — Posted: 2024-11-15

Secreted cytokines from inflammatory macrophages modulate sex differences in valvular interstitial cells on hydrogel biomaterials

Felix Velez, N. E., Tu, K., Guo, P., Reeves, R. R., Aguado, B. A.

10.1101/2024.11.15.623805 — Posted: 2024-11-15

Sequence specificity of an essential nuclear localization sequence in Mcm3

Wang, Z., Zhang, Y. J., Zhang, Q.-y., Bilsborrow, K., Leslie, M., Suhandynata, R. T., Zhou, H.

10.1101/2024.11.14.623588 — Posted: 2024-11-14

Genome-wide association study of borderline personality disorder identifies six loci and highlights shared risk with mental and somatic disorders

Streit, F., Awasthi, S., Hall, A. S., Niarchou, M., Marouli, E., Babajide, O., Braun, A., Frank, J., Zillich, L., Callies, C., Avetyan, D., Zillich, E., Naamanka, J., Aherrahrou, Z., Ahmad, Z.-U.-A., Ask, H., Batzler, A., Benros, M. E., Brand-de Wilde, O. M., Brunak, S., Bruun, M. T., Christoffersen, L. A., Colodro-Conde, L., Coombes, B. J., Corfield, E. C., Dahmen, N., Didriksen, M., Dinh, K. M., Djurovic, S., Dowsett, J., Drange, O. K., Dukal, H., Edelmann, S., Erikstrup, C., Espinola, M. K., Fassbinder, E., Faucon, A., Ferreira de Sa, D. S., Foo, J. C., Gilles, M., Gutierrez-Zotes, A., Hans

10.1101/2024.11.12.24316957 — Posted: 2024-11-13

Lysosomes cell autonomously regulate myeloid cell states and immune responses

Tejwani, L., Balak, C., Skuja, L. L., Tatarakis, D., Rana, A., Fitzgerald, G. A., Ha, C., de Melo, G. L., Sun, E. W., Heffner, C. M., Simon, M. J., Dugas, J. C., Sarrafha, L., Liang, E., Sandmann, T., Glass, C. K., Di Paolo, G.

10.1101/2024.11.11.623074 — Posted: 2024-11-13

scLong: A Billion-Parameter Foundation Model for Capturing Long-Range Gene Context in Single-Cell Transcriptomics

Bai, D., Mo, S., Zhang, R., Luo, Y., Gao, J., Yang, J. P., Wu, Q., Singh, D., Rahmani, H., Amariuta, T., Grotjahn, D., Zhong, S., Lewis, N., Wang, W., Ideker, T., Xie, P., Xing, E.

10.1101/2024.11.09.622759 — Posted: 2024-11-12

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