Channel:  Human Cell Atlas

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

141 Articles

The Human Cell Atlas
Regev, A., Teichmann, S., Lander, E. S., Amit, I., Benoist, C., Birney, E., Bodenmiller, B., Campbell, P., Carninci, P., Clatworthy, M., Clevers, H., Deplancke, B., Dunham, I., Eberwine, J., Eils, R., Enard, W., Farmer, A., Fugger, L., Gottgens, B., Hacohen, N., Haniffa, M., Hemberg, M., Kim, S. K., Klenerman, P., Kriegstein, A., Lein, E., Linnarsson, S., Lundeberg, J., Majumder, P., Marioni, J., Merad, M., Mhlanga, M., Nawijn, M., Netea, M., Nolan, G., Pe'er, D., Philipakis, A., Ponting, C. P., Quake, S. R., Reik, W., Rozenblatt-Rosen, O., Sanes, J. R., Satija, R., Shumacher, T., Shalek, A. K
10.1101/121202 — Posted: 2017-05-08
Single-Cell Transcriptomic Analysis of Human Lung Reveals Complex Multicellular Changes During Pulmonary Fibrosis
Reyfman, P. A., Walter, J. M., Joshi, N., Anekalla, K. R., McQuattie-Pimentel, A. C., Chiu, S., Fernandez, R., Akbarpour, M., Chen, C.-I., Ren, Z., Verma, R., Abdala-Valencia, H., Nam, K., Chi, M., Han, S., Gonzalez-Gonzalez, F. J., Soberanes, S., Watanabe, S., Williams, K. J. N., Flozak, A. S., Nicholson, T. T., Morgan, V. K., Hrusch, C. L., Guzy, R. D., Bonham, C. A., Sperling, A. I., Bag, R., Hamanaka, R. B., Mutlu, G. M., Yeldandi, A. V., Marshall, S. A., Shilatifard, A., Amaral, L. A. N., Perlman, H., Sznajder, J. I., Winter, D. R., Hinchcliff, M., Argento, A. C., Gillespie, C. T., Dematt
10.1101/296608 — Posted: 2018-04-06
Molecular architecture of the mouse nervous system
Zeisel, A., Hochgerner, H., Lonnerberg, P., Johnsson, A., Memic, F., van der Zwan, J., Haring, M., Braun, E., Borm, L., La Manno, G., Codeluppi, S., Furlan, A., Skene, N., Harris, K. D., Hjerling Leffler, J., Arenas, E., Ernfors, P., Marklund, U., Linnarsson, S.
10.1101/294918 — Posted: 2018-04-06
Palantir characterizes cell fate continuities in human hematopoiesis
Setty, M., Kiseliovas, V., Levine, J., Gayoso, A., Mazutis, L., Pe'er, D.
10.1101/385328 — Posted: 2018-08-05
Conserved cell types with divergent features between human and mouse cortex
Hodge, R. D., Bakken, T. E., Miller, J. A., Smith, K. A., Barkan, E. R., Graybuck, L. T., Close, J. L., Long, B., Penn, O., Yao, Z., Eggermont, J., Hollt, T., Levi, B. P., Shehata, S. I., Aevermann, B., Beller, A., Bertagnolli, D., Brouner, K., Casper, T., Cobbs, C., Dalley, R., Dee, N., Ding, S.-L., Ellenbogen, R. G., Fong, O., Garren, E., Goldy, J., Gwinn, R. P., Hirschstein, D., Keene, C. D., Keshk, M., Ko, A. L., Lathia, K., Mahfouz, A., Maltzer, Z., McGraw, M., Nguyen, T. N., Nyhus, J., Ojemann, J. G., Oldre, A., Parry, S., Reynolds, S., Rimorin, C., Shapovalova, N. V., Somasundaram, S.
10.1101/384826 — Posted: 2018-08-05
Reconstructing the human first trimester fetal-maternal interface using single cell transcriptomics
Vento-Tormo, R., Efremova, M., Botting, R. A., Turco, M. Y., Vento-Tormo, M., Meyer, K. B., Park, J., Stephenson, E., Polanski, K., Payne, R. P., Goncalves, A., Zou, A., Henriksson, J., Wood, L., Lisgo, S., Filby, A., Wright, G. J., Stubbington, M. J., Haniffa, M., Moffett, A., Teichmann, S. A.
10.1101/429589 — Posted: 2018-09-29
Nuclei multiplexing with barcoded antibodies for single-nucleus genomics
Gaublomme, J. T., Li, B., McCabe, C., Knecht, A., Drokhlyansky, E., Van Wittenberghe, N., Waldman, J., Dionne, D., Nguyen, L., De Jager, P., Yeung, B., Zhao, X., Habib, N., Rozenblatt-Rosen, O., Regev, A.
10.1101/476036 — Posted: 2018-11-23
A cellular census of healthy lung and asthmatic airway wall identifies novel cell states in health and disease
Vieira Braga, F. A., Kar, G., Berg, M., Carpaij, O. A., Polanski, K., Simon, L. M., Brouwer, S., Gomes, T., Hesse, L., Jiang, J., Fasouli, E. S., Efremova, M., Vento-Tormo, R., Affleck, K., Palit, S., Strzelecka, P., Firth, H. V., Mahbubani, K. T., Cvejic, A., Meyer, K. B., Saeb-Parsy, K., Luinge, M., Brandsma, C.-A., Timens, W., Angelidis, I., Strunz, M., Koppelman, G. H., van Oosterhout, A. J., Schiller, H. B., Theis, F. J., van den Berge, M., Nawijn, M. C., Teichmann, S. A.
10.1101/527408 — Posted: 2019-01-23
Systematic Comparison of High-throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation
Selewa, A., Dohn, R., Eckart, H., Lozano, S., Xie, B., Gauchat, E., Elorbany, R., Rhodes, K., Burnett, J., Gilad, Y., Pott, S., Basu, A.
10.1101/585901 — Posted: 2019-03-26
Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects
Mereu, E., Lafzi, A., Moutinho, C., Ziegenhain, C., MacCarthy, D. J., Alvarez, A., Batlle, E., Sagar, , Grün, D., Lau, J. K., Boutet, S., Sanada, C., Ooi, A., Jones, R. C., Kaihara, K., Brampton, C., Talaga, Y., Sasagawa, Y., Tanaka, K., Hayashi, T., Nikaido, I., Fischer, C., Sauer, S., Trefzer, T., Conrad, C., Adiconis, X., Nguyen, L. T., Regev, A., Levin, J. Z., Janjic, A., Wange, L. E., Bagnoli, J. W., Parekh, S., Enard, W., Gut, M., Sandberg, R., Gut, I., Stegle, O., Heyn, H.
10.1101/630087 — Posted: 2019-05-13

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