Channel:  Human Cell Atlas

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

76 Articles

Gene-level alignment of single cell trajectories informs the progression of in vitro T cell differentiation
Sumanaweera, D., Suo, C., Muraro, D., Dann, E., Polanski, K., Steemers, A., Park, J.-E., Dumitrascu, B., Teichmann, S.
10.1101/2023.03.08.531713 — Posted: 2023-03-10
Dandelion utilizes single cell adaptive immune receptor repertoire to explore lymphocyte developmental origins
Suo, C., Polanski, K., Dann, E., Lindeboom, R. G. H., Vilarrasa Blasi, R., Vento-Tormo, R., Haniffa, M., Meyer, K. B., Dratva, L. M., Tuong, Z. K., Clatworthy, M. R., Teichmann, S.
10.1101/2022.11.18.517068 — Posted: 2023-01-27
The emergence of goblet inflammatory or ITGB6hi nasal progenitor cells determines age-associated SARS-CoV-2 pathogenesis
Woodall, M., Cujba, A.-M., Worlock, K. B., Case, K.-M., Masonou, T., Yoshida, M., Polanski, K., Huang, N., Lindeboom, R. G., Mamanova, L., Bolt, L., Richardson, L., Ellis, S., Palor, M., Burgoyne, T., Pinto, A., Moulding, D. A., McHugh, T. D., Saleh, A., Kilich, E., Mehta, P., O'Callaghan, C., Zhou, J., Barclay, W., De Coppi, P., Butler, C. R., Vinette, H., Roy, S., Breuer, J., Chambers, R. C., Heywood, W. E., Mills, K., Hynds, R. E., Teichmann, S. A., Meyer, K. B., Nikolic, M. Z., Smith, C. M.
10.1101/2023.01.16.524211 — Posted: 2023-01-18
Singletrome: A method to analyze and enhance the transcriptome with long noncoding RNAs for single cell analysis
RAHMAN, R. U., Ahmad, I., Sparks, R., Saad, A. B., Mullen, A.
10.1101/2022.10.31.514182 — Posted: 2022-11-24
Comprehensive cell atlas of the first-trimester developing human brain
Braun, E., Danan-Gotthold, M., Borm, L. E., Vinsland, E., Lee, K. W., Lönnerberg, P., Hu, L., Li, X., He, X., Andrusivova, Z., Lundeberg, J., Arenas, E., Barker, R. A., Sundström, E., Linnarsson, S.
10.1101/2022.10.24.513487 — Posted: 2022-10-25
Transcriptomic diversity of cell types across the adult human brain
Siletti, K., Hodge, R. D., Mossi Albiach, A., Hu, L., Lee, K. W., Lönnerberg, P., Bakken, T. E., Ding, S.-L., Clark, M., Casper, T., Dee, N., Gloe, J., Keene, C. D., Nyhus, J., Tung, H., Yanny, A. M., Arenas, E., Lein, E. S., Linnarsson, S.
10.1101/2022.10.12.511898 — Posted: 2022-10-14
TACCO: Unified annotation transfer and decomposition of cell identities for single-cell and spatial omics
Mages, S., Moriel, N., Avraham-Davidi, I., Murray, E., Chen, F., Rozenblatt-Rosen, O., Klughammer, J., Regev, A., Nitzan, M.
10.1101/2022.10.02.508471 — Posted: 2022-10-05
A human fetal lung cell atlas uncovers proximal-distal gradients of differentiation and key regulators of epithelial fates
He, P., Lim, K., Sun, D., Pett, J. P., Jeng, Q., Polanski, K., Dong, Z., Bolt, L., Richardson, L., Mamanova, L., Dabrowska, M., Wilbrey-Clark, A. L., Madissoon, E., Tuong, K. Z., Dann, E., Suo, C., Goh, I., Yoshida, M., Nikolic, M. Z., James, S. M., He, X., Barker, R. A., Teichmann, S., Marioni, J., Meyer, K. B., Rawlins, E. L.
10.1101/2022.01.11.474933 — Posted: 2022-09-30
Single-Cell Transcriptome Analyses Reveal the Cell Diversity and Developmental Features of Human Gastric and Metaplastic Mucosa
Tsubosaka, A., Komura, D., Katoh, H., Kakiuchi, M., Onoyama, T., Yamamoto, A., Abe, H., Seto, Y., Ushiku, T., Ishikawa, S.
10.1101/2022.05.22.493006 — Posted: 2022-08-18
Spatial Transcriptomics-correlated Electron Microscopy
Androvic, P., Schifferer, M., Perez Anderson, K., Cantuti-Castelvetri, L., Ji, H., Liu, L., Besson-Girard, S., Knoferle, J., Simons, M., Gokce, O.
10.1101/2022.05.18.492475 — Posted: 2022-06-27

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