Channel:  4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

411 Articles

Nanoscale cellular organization of viral RNA and proteins in SARS-CoV-2 replication organelles
Andronov, L., Han, M., Zhu, Y., Roy, A. R., Barentine, A. E. S., Garhyan, J., Qi, L. S., Moerner, W. E.
10.1101/2023.11.07.566110 — Posted: 2023-11-29
ChromaFactor: deconvolution of single-molecule chromatin organization with non-negative matrix factorization
Gunsalus, L. M., Keiser, M. J., Pollard, K. S.
10.1101/2023.11.22.568268 — Posted: 2023-11-22
Post-transcriptional splicing can occur in a slow-moving zone around the gene
Cote, A. J., O'Farrell, A., Dardani, I., Dunagin, M., Cote, C. J., Wan, Y., Bayatpour, S., Drexler, H. L., Alexander, K. A., Chen, F., Wassie, A. T., Patel, R., Pham, K., Boyden, E. S., Berger, S., Phillips-Cremins, J., Churchman, L. S., Raj, A.
10.1101/2020.04.06.028092 — Posted: 2023-11-13
Genome folding principles revealed in condensin-depleted mitotic chromosomes
Zhao, H., Lin, Y., Lin, E., Liu, F., Shu, L., Jing, D., Wang, B., Wang, M., Shan, F., Zhang, L., Lam, J., Midla, S., Giardine, B., Keller, C., Hardison, R., Blobel, G., Zhang, H.
10.1101/2023.11.09.566494 — Posted: 2023-11-13
SuPreMo: a computational tool for streamlining in silico perturbation using sequence-based predictive models
Gjoni, K., Pollard, K. S.
10.1101/2023.11.03.565556 — Posted: 2023-11-05
Nucleolus and centromere TSA-Seq reveals variable localization of heterochromatin in different cell types
Kumar, P., Gholamalamdari, O., Zhang, Y., Zhang, L., Vertii, A., van Schaik, T., Peric-Hupkes, D., Sasaki, T., Gilbert, D. M., van Steensel, B., Ma, J., Kaufman, P. D., Belmont, A. S.
10.1101/2023.10.29.564613 — Posted: 2023-11-01
Exploring the Roles of RNAs in Chromatin Architecture Using Deep Learning
Kuang, S., Pollard, K. S.
10.1101/2023.10.22.563498 — Posted: 2023-10-24
Drug-Mediated Control of Receptor Valency Enhances Immune Cell Potency
Finn, P., Chavez, M., Chen, X., Wang, H., Rane, D. A., Gurjar, J., Qi, L. S.
10.1101/2023.01.04.522664 — Posted: 2023-10-22
Phase separation of Myc differentially regulates gene transcription
Yang, J., Chung, C.-I., Koach, J., Liu, H., Navalkar, A., Ma, Z., Zhao, Q., Yang, X., Mittag, T., Shen, Y., Weiss, W. A., Shu, X.
10.1101/2022.06.28.498043 — Posted: 2023-10-21
The H3.3 K36M oncohistone disrupts the establishment of epigenetic memory through loss of DNA methylation
Sinha, J., Nickels, J. F., Thurm, A. R., Ludwig, C. H., Archibald, B. N., Hinks, M. M., Wan, J., Fang, D., Bintu, L.
10.1101/2023.10.13.562147 — Posted: 2023-10-14

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