Channel:  NCI Human Tumor Atlas Network

74 Articles

Highly Multiplexed 3D Profiling of Cell States and Immune Niches in Human Tumours
Yapp, C., Nirmal, A. J., Zhou, F. Y., Wong, A. Y. H., Tefft, J., Lu, Y. D., Shang, Z., Maliga, Z., Montero Llopis, P., Murphy, G. F., Lian, C., Danuser, G., Santagata, S., Sorger, P. K.
10.1101/2023.11.10.566670 — Posted: 2025-04-11
Somatic mutations distinguish melanocyte subpopulations in human skin
Tandukar, B., Deivendran, D., Chen, L., Bahrani, N., Weier, B., Sharma, H., Cruz-Pacheco, N., Hu, M., Marks, K., Zitnay, R. G., Bandari, A. K., Nekoonam, R., Yeh, I., Judson-Torres, R., Shain, A. H.
10.1101/2025.02.07.637114 — Posted: 2025-02-08
Longitudinal and multimodal auditing of tumor adaptation to CDK4/6 inhibitors in HR+ metastatic breast cancers
Creason, A. L., Egger, J., Watson, C., Sivagnanam, S., Chin, K., MacPherson, K., Lin, J.-R., Chen, Y.-A., Johnson, B. E., Feiler, H. S., Galipeau, D., Navin, N. E., Demir, E., Chang, Y. H., Corless, C. L., Mitri, Z. I., Thomas, G., Sorger, P. K., Adey, A. C., Coussens, L. M., Gray, J. W., Mills, G. B., Goecks, J.
10.1101/2023.09.27.557464 — Posted: 2025-01-06
Genetic evolution of keratinocytes to cutaneous squamous cell carcinoma
Tandukar, B., Deivendran, D., Chen, L., Cruz-Pacheco, N., Sharma, H., Xu, A., Bandari, A. K., Chen, D., George, C., Marty, A., Cho, R. J., Cheng, J., Saylor, D., Gerami, P., Arron, S. T., Bastian, B. C., Shain, A. H.
10.1101/2024.07.23.604673 — Posted: 2024-12-02
Actin dysregulation induces neuroendocrine plasticity and immune evasion: a vulnerability of small cell lung cancer
Seo, Y., Zhang, S., Jang, J., Ko, K.-P., Kim, K.-B., Huang, Y., Kim, D.-W., Kim, B., Zou, G., Zhang, J., Jun, S., Chu, W., Kirk, N. A., Hwang, Y. E., Ban, Y. H., Dhar, S. S., Chan, J. M., Lee, M., Rudin, C. M., Park, K.-S., Park, J.-I.
10.1101/2023.02.15.528365 — Posted: 2024-11-12
Tumor microenvironmental determinants of high-risk DCIS progression
Glencer, A., Ramalingam, K., Schindler, N., Mori, H., Ghule, P., Lee, K. C., Nachmanson, D., Officer, A., Harismendy, O., Stein, J. L., Stein, G., Weaver, D., Yau, C., Hirst, G. L., Campbell, M. J., Esserman, L. J., Borowsky, A. D.
10.1101/2023.12.01.569676 — Posted: 2024-03-19
A longitudinal single-cell and spatial multiomic atlas of pediatric high-grade glioma
Sussman, J. H., Oldridge, D. A., Yu, W., Chen, C.-H., Zellmer, A. M., Rong, J., Parvaresh-Rizi, A., Thadi, A., Xu, J., Bandyopadhyay, S., Sun, Y., Wu, D., Hunter, C. E., Brosius, S., Ahn, K. J., Baxter, A. E., Koptyra, M. P., Vanguri, R., McGrory, S., Resnick, A. C., Storm, P. B., Amankulor, N. M., Santi, M., Viaene, A. N., Zhang, N., De Raedt, T., Cole, K., Tan, K.
10.1101/2024.03.06.583588 — Posted: 2024-03-08
A cellular and spatial atlas of TP53-associated tissue remodeling in lung adenocarcinoma
Zhao, W., Kepecs, B., Mahadevan, N. R., Segerstolpe, A., Weirather, J. L., Besson, N. R., Giotti, B., Soong, B. Y., Li, C., Vigneau, S., Slyper, M., Wakiro, I., Jane-Valbuena, J., Ashenberg, O., Rotem, A., Bueno, R., Rozenblatt-Rosen, O., Pfaff, K., Rodig, S., Hata, A. N., Regev, A., Johnson, B. E., Tsankov, A. M.
10.1101/2023.06.28.546977 — Posted: 2024-02-14
A spatial cell atlas of neuroblastoma reveals developmental, epigenetic and spatial axis of tumor heterogeneity
Patel, A. G., Ashenberg, O., Collins, N. B., Segerstolpe, A., Jiang, S., Slyper, M., Huang, X., Caraccio, C., Jin, H., Sheppard, H., Xu, K., Chang, T.-C., Orr, B. A., Shirinifard, A., Chapple, R. H., Shen, A., Clay, M. R., Tatevossian, R. G., Reilly, C., Patel, J., Lupo, M., Cline, C., Dionne, D., Porter, C. B. M., Waldman, J., Bai, Y., Zhu, B., Barrera, I., Murray, E., Vigneau, S., Napolitano, S., Wakiro, I., Wu, J., Grimaldi, G., Dellostritto, L., Helvie, K., Rotem, A., Lako, A., Cullen, N., Pfaff, K. L., Karlstrom, A., Jane-Valbuena, J., Todres, E., Thorner, A., Geeleher, P., Rodig, S. J.
10.1101/2024.01.07.574538 — Posted: 2024-01-16
Temporal recording of mammalian development and precancer
Islam, M., Yang, Y., Simmons, A. J., Shah, V. M., Pavan, M. K., Xu, Y., Tasneem, N., Chen, Z., Trinh, L. T., Molina, P., Ramirez-Solano, M. A., Sadien, I., Dou, J., Chen, K., Magnuson, M. A., Rathmell, J., Macara, I. G., Winton, D. J., Liu, Q., Zafar, H., Kalhor, R., Church, G. M., Shrubsole, M. J., Coffey, R. J., Lau, K.
10.1101/2023.12.18.572260 — Posted: 2023-12-19

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