Channel:  NCI Human Tumor Atlas Network

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

72 Articles

Pediatric High Grade Glioma Resources From the Children’s Brain Tumor Tissue Consortium (CBTTC) and Pediatric Brain Tumor Atlas (PBTA)
Ijaz, H., Koptyra, M. P., Gaonkar, K. S., Rokita, J. L., Baubet, V. P., Tauhid, L., Zhu, Y., Brown, M. A., Lopez Garcia, G., Zhang, B., Diskin, S. J., Vaksman, Z., Mason, J. L., Appert, E. M., Lilly, J. V., Lulla, R. R., De Raedt, T., Heath, A. P., Felmeister, A., Raman, P., Nazarian, J., Santi-Vicini, M., Storm, P. B., Resnick, A. C., Waanders, A. J., Cole, K. A.
10.1101/656587 — Posted: 2019-05-31
A workflow for visualizing human cancer biopsies using large-format electron microscopy
Riesterer, J. L., Lopez, C. S., Stempinski, E. S., Williams, M., Loftis, K., Stoltz, K., Thibault, G., Lanicault, C., Williams, T., Gray, J. W.
10.1101/675371 — Posted: 2019-06-19
A quantitative framework for evaluating single-cell data structure preservation by dimensionality reduction techniques
Heiser, C. N., Lau, K. S.
10.1101/684340 — Posted: 2019-06-27
Predicting Primary Site of Secondary Liver Cancer with a Neural Estimator of Metastatic Origin (NEMO)
Schau, G. F., Burlingame, E. A., Thibault, G., Anekpuritanang, T., Wang, Y., Gray, J. W., Corless, C., Chang, Y. H.
10.1101/689828 — Posted: 2019-07-02
Highly multiplexed immunofluorescence images and single-cell data of immune markers in tonsil and lung cancer
Rashid, R., Gaglia, G., Chen, Y.-A., Lin, J.-R., Du, Z., Maliga, Z., Schapiro, D., Yapp, C., Muhlich, J., Sokolov, A., Sorger, P., Santagata, S.
10.1101/704114 — Posted: 2019-07-17
SHIFT: speedy histological-to-immunofluorescent translation of whole slide images enabled by deep learning
Burlingame, E. A., McDonnell, M., Schau, G. F., Thibault, G., Lanciault, C., Morgan, T., Johnson, B. E., Corless, C., Gray, J. W., Chang, Y. H.
10.1101/730309 — Posted: 2019-08-15
Coordinated cellular neighborhoods orchestrate antitumoral immunity at the colorectal cancer invasive front
Schürch, C. M., Bhate, S. S., Barlow, G. L., Phillips, D. J., Noti, L., Zlobec, I., Chu, P., Black, S., Demeter, J., McIlwain, D. R., Samusik, N., Goltsev, Y., Nolan, G. P.
10.1101/743989 — Posted: 2019-08-24
Commensal-derived succinate enhances tuft cell specification and suppresses ileal inflammation
Banerjee, A., Herring, C. A., Kim, H., Chen, B., Simmons, A. J., Southard-Smith, A. N., White, J. R., Ramirez Solano, M. A., Scoville, E. A., Liu, Q., Washington, M. K., Lau, K. S.
10.1101/776724 — Posted: 2019-09-20
Machine and deep learning single-cell segmentation and quantification of multi-dimensional tissue images
McKinley, E. T., Roland, J. T., Franklin, J. L., Macedonia, M. C., Vega, P. N., Shin, S., Coffey, R. J., Lau, K.
10.1101/790162 — Posted: 2019-10-02
Genetic Heterogeneity Profiling by Single Cell RNA Sequencing
Zhou, Z., Zhang, N. R., Xu, B., Minn, A.
10.1101/457622 — Posted: 2019-10-17

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