bioRxiv/medRxiv TRiP Review Activity

246 Reviews — GigaScience — Bioinformatics

Most recent first Previous |  Page 24: Articles 231-240  | Next

NanoSim: nanopore sequence read simulator based on statistical characterization
Chen Yang, Justin Chu, René L Warren, Inanç Birol
10.1101/044545 — Posted: 2016-03-18 — Discussion: 2022-01-13  GigaScience
de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer
Benjamin Istace, Anne Friedrich, Léo d'Agata, Sébastien Faye, Emilie Payen, Odette Beluche, Claudia Caradec, Sabrina Davidas, Corinne Cruaud, Gianni Liti, Arnaud Lemainque, Stefan Engelen, Patrick Wincker, Joseph Schacherer, Jean-Marc Aury
10.1101/066613 — Posted: 2016-07-28 — Discussion: 2022-01-13  GigaScience
Kronos: a workflow assembler for genome analytics and informatics
M Jafar Taghiyar, Jamie Rosner, Diljot Grewal, Bruno Grande, Radhouane Aniba, Jasleen Grewal, Paul C Boutros, Ryan D Morin, Ali Bashashati, Sohrab P Shah
10.1101/040352 — Posted: 2016-02-19 — Discussion: 2022-01-13  GigaScience
iCAVE: an open source tool for immersive 3D visualization of complex biomolecular interaction networks
Vaja Liluashvili, Selim Kalayci, Eugene Flouder, Manda Wilson, Aaron Gabow, Zeynep H. Gümüş
10.1101/061374 — Posted: 2016-06-29 — Discussion: 2022-01-13  GigaScience
Quantitative monitoring of nucleotide sequence data from genetic resources in context of their citation in the scientific literature
Lange, M., Alako, B., Cochrane, G., Ghaffar, M., Mascher, M., Habekost, P.-K., Hillebrand, U., Scholz, U., Zunder, F., Freitag, J., Scholz, A. H.
10.1101/2021.05.10.443393 — Posted: 2021-05-10 — Discussion: 2022-01-03  GigaScience
AGOUTI: improving genome assembly and annotation using transcriptome data
Simo V Zhang, Luting Zhuo, Matthew W Hahn
10.1101/033019 — Posted: 2015-11-26 — Discussion: 2022-01-03  GigaScience
Tools and techniques for computational reproducibility
Stephen R Piccolo, Michael B Frampton
10.1101/022707 — Posted: 2015-07-17 — Discussion: 2022-01-03  GigaScience
ISA API: An open platform for interoperable life science experimental metadata
Johnson, D., Cochrane, K., Davey, R. P., Etuk, A., Gonzalez-Beltran, A., Haug, K., Izzo, M., Larralde, M., Lawson, T. N., Minotto, A., Moreno, P., Nainala, V. C., O'Donovan, C., Pireddu, L., Roger, P., Shaw, F., Steinbeck, C., Weber, R. J., Sansone, S.-A., Rocca-Serra, P.
10.1101/2020.11.13.382119 — Posted: 2020-11-16 — Discussion: 2022-01-03  GigaScience
Clusterflock: A Flocking Algorithm for Isolating Congruent Phylogenomic Datasets
Apurva Narechania, Richard H Baker, Rob DeSalle, Barun Mathema, Barry Kreiswirth, Sergios-Orestis Kolokotronis, Paul J Planet
10.1101/045773 — Posted: 2016-03-25 — Discussion: 2022-01-03  GigaScience
Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION sequencing
Minh Duc Cao, Devika Ganesamoorthy, Alysha Elliott, Huihui Zhang, Matthew Cooper, Lachlan Coin
10.1101/019356 — Posted: 2015-05-15 — Discussion: 2022-01-03  GigaScience

Evaluation Sources