bioRxiv/medRxiv TRiP Review Activity

424 Reviews — GigaScience — All Subjects

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Open RGB Imaging Workflow for Morphological and Morphometric Analysis of Fruits using AI: A Case Study on Almonds.
Mas-Gomez, J., Rubio, M., Dicenta, F., Martinez-Garcia, P. J.
10.1101/2025.05.05.652179 — Posted: 2025-05-06 — Discussion: 2026-01-05  GigaScience
Haplotype-resolved chromosome-level genome assemblies of four Diamesa species reveal the genetic basis of cold tolerance and high-altitude adaptations in arctic chironomids
Martin, S. L. F., La Torre, R., Danneels, B., Tooming-Klunderud, A., Skage, M., Kollias, S., Torresen, O. K., Falahati Anbaran, M., Stur, E., Jakobsen, K. S., Martin, M. D., Ekrem, T.
10.1101/2025.07.30.667619 — Posted: 2025-08-01 — Discussion: 2026-01-05  GigaScience
An Integrative Multi-Omics Random Forest Framework for Robust Biomarker Discovery
Zhang, W., Huang, H., Wang, L., Brian, L. D., Chen, S. X.
10.1101/2025.03.05.641533 — Posted: 2025-03-06 — Discussion: 2026-01-05  GigaScience
The Good, the Bad, and the Ugly: Segmentation-Based Quality Control of Structural Magnetic Resonance Images
Dahnke, R., Kalc, P., Ziegler, G., Grosskreutz, J., Gaser, C.
10.1101/2025.02.28.640096 — Posted: 2025-03-01 — Discussion: 2026-01-05  GigaScience
Comparative evaluation of computational methods for reconstruction of human viral genomes
Sousa, M. J. P., Toppinen, M., Pyöriä, L., Hedman, K., Sajantila, A., Perdomo, M. F., Pratas, D.
10.1101/2025.01.17.633368 — Posted: 2025-01-22 — Discussion: 2026-01-05  GigaScience
A sulfatide-centered ultra-high resolution magnetic resonance MALDI imaging benchmark dataset for MS1-based lipid annotation tools
Gruber, L., Schmidt, S., Enzlein, T., Hopf, C.
10.1101/2025.10.20.683394 — Posted: 2025-10-20 — Discussion: 2026-01-05  GigaScience
RNA-SeqEZPZ: A Point-and-Click Pipeline for Comprehensive Transcriptomics Analysis with Interactive Visualizations
Taslim, C. R., Zhang, Y., Kendall, G. C., Theisen, E. R.
10.1101/2024.12.20.629844 — Posted: 2024-12-23 — Discussion: 2025-11-28  GigaScience
pyRootHair: Machine Learning Accelerated Software for High-Throughput Phenotyping of Plant Root Hair Traits
Tsang, I., Percival-Alwyn, L., Rawsthorne, S., Cockram, J., Leigh, F., Atkinson, J.
10.1101/2025.07.14.664697 — Posted: 2025-07-18 — Discussion: 2025-11-28  GigaScience
On the path to reference genomes for all biodiversity: lessons learned and laboratory protocols created in the Sanger Tree of Life core laboratory over the first 2000 species
Howard, C., Denton, A., Jackson, B., Bates, A., Jay, J., Yatsenko, H., Raman, P. S., Thomas, A., Oatley, G., do Amaral, R. V., Göktan, Z. E., Gomez, J. P. N., Clayton Lucey, I., Sinclair, E., Quail, M. A., Blaxter, M., Howe, K., Lawniczak, M.
10.1101/2025.04.11.648334 — Posted: 2025-04-11 — Discussion: 2025-10-30  GigaScience
Ultra-deep long-read metagenomics captures diverse taxonomic and biosynthetic potential of soil microbes
Bagci, C., Negri, T., Buena-Atienza, E., Gross, C., Ossowski, S., Ziemert, N.
10.1101/2025.05.28.656579 — Posted: 2025-05-28 — Discussion: 2025-10-30  GigaScience

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