bioRxiv/medRxiv TRiP Review Activity

336 Reviews — GigaScience — All Subjects

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Rice Galaxy: an open resource for plant science
Juanillas, V. M. J., Dereeper, A., Beaume, N., Droc, G., Dizon, J., Mendoza, J. R., Perdon, J. P., Mansueto, L., Triplett, L., Lang, J., Zhou, G., Ratharanjan, K., Plale, B., Haga, J., Leach, J. E., Ruiz, M., Thomson, M., Alexandrov, N., Larmande, P., Kretzschmar, T., Mauleon, R. P.
10.1101/358754 — Posted: 2018-06-29 — Discussion: 2022-01-23  GigaScience
Evaluation of computational genotyping of Structural Variations for clinical diagnoses.
Chander, V., Gibbs, R. A., Sedlazeck, F. J.
10.1101/558247 — Posted: 2019-02-22 — Discussion: 2022-01-23  GigaScience
Laniakea: an open solution to provide Galaxy \"on-demand\" instances over heterogeneous cloud infrastructures.
Tangaro, M. A., Donvito, G., Antonacci, M., Chiara, M., Mandreoli, P., Pesole, G., Zambelli, F.
10.1101/472464 — Posted: 2018-11-19 — Discussion: 2022-01-23  GigaScience
GADMA: Genetic Algorithm for Automatic Inferring Joint Demographic History of Multiple Populations from Allele Frequency Spectrum
Noskova, E., Ulyantsev, V., O'Brien, S. J., Dobrynin, P.
10.1101/407734 — Posted: 2018-09-04 — Discussion: 2022-01-23  GigaScience
A chromosome-scale assembly of the major African malaria vector Anopheles funestus
Ghurye, J., Koren, S., Small, S. T., Redmond, S., Howell, P., Phillippy, A. M., Besansky, N. J.
10.1101/492777 — Posted: 2018-12-10 — Discussion: 2022-01-23  GigaScience
Inferring putative ancient whole genome duplications in the 1000 Plants (1KP) initiative: access to gene family phylogenies and age distributions
Li, Z., Barker, M. S.
10.1101/735076 — Posted: 2019-08-14 — Discussion: 2022-01-23  GigaScience
Multifaceted Hi-C benchmarking: what makes a difference in chromosome-scale genome scaffolding?
Kadota, M., Nishimura, O., Miura, H., Tanaka, K., Hiratani, I., Kuraku, S.
10.1101/659623 — Posted: 2019-06-07 — Discussion: 2022-01-23  GigaScience
CropMonitor: a scalable open-source experiment management system for distributed plant phenotyping and IoT-based crop management
Reynolds, D., Ball, J., Bauer, A., Griffiths, S., Zhou, J.
10.1101/451120 — Posted: 2018-10-26 — Discussion: 2022-01-23  GigaScience
RootNav 2.0: Deep Learning for Automatic Navigation of Complex Plant Root Architectures
Yasrab, R., Atkinson, J. A., Wells, D. M., French, A. P., Pridmore, T. P., Pound, M. P.
10.1101/709147 — Posted: 2019-07-20 — Discussion: 2022-01-23  GigaScience
A signature of cognitive deficits and brain atrophy that is highly predictive of progression to Alzheimer’s dementia
Tam, A., Dansereau, C., Iturria-Medina, Y., Urchs, S., Orban, P., Breitner, J., Bellec, P., Alzheimer's Disease Neuroimaging Initiative
10.1101/352344 — Posted: 2018-06-20 — Discussion: 2022-01-23  GigaScience

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