bioRxiv/medRxiv TRiP Review Activity

456 Reviews — GigaScience — All Subjects

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EWAS-Galaxy: a tools suite for population epigenetics integrated into Galaxy
Murat, K., Gruning, B., Poterlowicz, P. W., Westgate, G., Tobin, D. J., Poterlowicz, K.
10.1101/553784 — Posted: 2019-02-19 — Discussion: 2022-01-24  GigaScience
BiSulfite Bolt: A BiSulfite Sequencing Analysis Platform
Farrell, C., Thompson, M., Tosevska, A., Oyetunde, A., Pellegrini, M.
10.1101/2020.10.06.328559 — Posted: 2020-10-08 — Discussion: 2022-01-24  GigaScience
Streamlining Data-Intensive Biology With Workflow Systems
Reiter, T., Brooks, P. T., Irber, L., Joslin, S. E. K., Reid, C. M., Scott, C., Brown, C. T., Pierce, N. T.
10.1101/2020.06.30.178673 — Posted: 2020-07-01 — Discussion: 2022-01-24  GigaScience
CRISPRCasIdentifier: Machine learning for accurate identification and classification of CRISPR-Cas systems
Padilha, V. A., Alkhnbashi, O. S., Shah, S. A., de Carvalho, A. C. P. L. F., Backofen, R.
10.1101/817619 — Posted: 2019-10-31 — Discussion: 2022-01-24  GigaScience
DrivAER: Identification of driving transcriptional programs in single-cell RNA sequencing data
Simon, L. M., Yan, F., Zhao, Z.
10.1101/864165 — Posted: 2019-12-05 — Discussion: 2022-01-24  GigaScience
A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning
Yen, E. C., McCarthy, S. A., Galarza, J. A., Generalovic, T. N., Pelan, S., Nguyen, P., Meier, J. I., Warren, I. A., Mappes, J., Durbin, R., Jiggins, C. D.
10.1101/2020.02.28.970020 — Posted: 2020-03-02 — Discussion: 2022-01-24  GigaScience
GigaSOM.jl: High-perfomance clustering and visualization of huge cytometry datasets
Kratochvil, M., Hunewald, O., Heirendt, L., Verissimo, V., Vondrasek, J., Satagopam, V. P., Schneider, R., Trefois, C., Ollert, M.
10.1101/2020.08.03.234187 — Posted: 2020-08-04 — Discussion: 2022-01-24  GigaScience
Global ocean resistome revealed: exploring Antibiotic Resistance Genes (ARGs) abundance and distribution on TARA oceans samples through machine learning tools
Cuadrat, R. R. d. C., Sorokina, M., Andrade, B. G., Davila, A. M. R.
10.1101/765446 — Posted: 2019-09-19 — Discussion: 2022-01-24  GigaScience
Correcting for experiment-specific variability in expression compendia can remove underlying signals
Lee, A. J., Park, Y., Doing, G., Hogan, D. A., Greene, C. S.
10.1101/2020.05.03.066597 — Posted: 2020-05-03 — Discussion: 2022-01-24  GigaScience
Multivariate GWAS: Generalized Linear Models, Prior Weights, and Double Sparsity
Chu, B. B., Keys, K. L., Sinsheimer, J. S., Lange, K.
10.1101/697755 — Posted: 2019-07-11 — Discussion: 2022-01-24  GigaScience

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