bioRxiv/medRxiv TRiP Review Activity

336 Reviews — GigaScience — All Subjects

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CWL-Airflow: a lightweight pipeline manager supporting Common Workflow Language
Kotliar, M., Kartashov, A., Barski, A.
10.1101/249243 — Posted: 2018-01-17 — Discussion: 2022-01-23  GigaScience
Accumulating computational resource usage of genomic data analysis workflow to optimize cloud computing instance selection
Ohta, T., Tanjo, T., Ogasawara, O.
10.1101/456756 — Posted: 2018-10-30 — Discussion: 2022-01-23  GigaScience
Evaluation of computational genotyping of Structural Variations for clinical diagnoses.
Chander, V., Gibbs, R. A., Sedlazeck, F. J.
10.1101/558247 — Posted: 2019-02-22 — Discussion: 2022-01-23  GigaScience
Laniakea: an open solution to provide Galaxy \"on-demand\" instances over heterogeneous cloud infrastructures.
Tangaro, M. A., Donvito, G., Antonacci, M., Chiara, M., Mandreoli, P., Pesole, G., Zambelli, F.
10.1101/472464 — Posted: 2018-11-19 — Discussion: 2022-01-23  GigaScience
GADMA: Genetic Algorithm for Automatic Inferring Joint Demographic History of Multiple Populations from Allele Frequency Spectrum
Noskova, E., Ulyantsev, V., O'Brien, S. J., Dobrynin, P.
10.1101/407734 — Posted: 2018-09-04 — Discussion: 2022-01-23  GigaScience
Rice Galaxy: an open resource for plant science
Juanillas, V. M. J., Dereeper, A., Beaume, N., Droc, G., Dizon, J., Mendoza, J. R., Perdon, J. P., Mansueto, L., Triplett, L., Lang, J., Zhou, G., Ratharanjan, K., Plale, B., Haga, J., Leach, J. E., Ruiz, M., Thomson, M., Alexandrov, N., Larmande, P., Kretzschmar, T., Mauleon, R. P.
10.1101/358754 — Posted: 2018-06-29 — Discussion: 2022-01-23  GigaScience
A chromosome-scale assembly of the major African malaria vector Anopheles funestus
Ghurye, J., Koren, S., Small, S. T., Redmond, S., Howell, P., Phillippy, A. M., Besansky, N. J.
10.1101/492777 — Posted: 2018-12-10 — Discussion: 2022-01-23  GigaScience
Inferring putative ancient whole genome duplications in the 1000 Plants (1KP) initiative: access to gene family phylogenies and age distributions
Li, Z., Barker, M. S.
10.1101/735076 — Posted: 2019-08-14 — Discussion: 2022-01-23  GigaScience
Multifaceted Hi-C benchmarking: what makes a difference in chromosome-scale genome scaffolding?
Kadota, M., Nishimura, O., Miura, H., Tanaka, K., Hiratani, I., Kuraku, S.
10.1101/659623 — Posted: 2019-06-07 — Discussion: 2022-01-23  GigaScience
CropMonitor: a scalable open-source experiment management system for distributed plant phenotyping and IoT-based crop management
Reynolds, D., Ball, J., Bauer, A., Griffiths, S., Zhou, J.
10.1101/451120 — Posted: 2018-10-26 — Discussion: 2022-01-23  GigaScience

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