bioRxiv/medRxiv TRiP Review Activity

248 Reviews — GigaScience — Bioinformatics

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Ultra-deep, long-read nanopore sequencing of mock microbial community standards
Nicholls, S. M., Quick, J. C., Tang, S., Loman, N. J.
10.1101/487033 — Posted: 2018-12-04 — Discussion: 2022-01-23  GigaScience
Identifying, understanding, and correcting technical biases on the sex chromosomes in next-generation sequencing data
Webster, T. H., Couse, M., Grande, B. M., Karlins, E., Phung, T., Richmond, P. A., Whitford, W., Wilson Sayres, M. A.
10.1101/346940 — Posted: 2018-06-14 — Discussion: 2022-01-23  GigaScience
Interpretable and accurate prediction models for metagenomics data
Prifti, E., Chevaleyre, Y., Hanczar, B., Belda Cuesta, E., Clement, K., Danchin, A., Zucker, J.-D.
10.1101/409144 — Posted: 2018-09-07 — Discussion: 2022-01-23  GigaScience
Accumulating computational resource usage of genomic data analysis workflow to optimize cloud computing instance selection
Ohta, T., Tanjo, T., Ogasawara, O.
10.1101/456756 — Posted: 2018-10-30 — Discussion: 2022-01-23  GigaScience
Evaluation of computational genotyping of Structural Variations for clinical diagnoses.
Chander, V., Gibbs, R. A., Sedlazeck, F. J.
10.1101/558247 — Posted: 2019-02-22 — Discussion: 2022-01-23  GigaScience
SciPipe - A workflow library for agile development of complex and dynamic bioinformatics pipelines
Lampa, S., Dahlö, M., Alvarsson, J., Spjuth, O.
10.1101/380808 — Posted: 2018-08-01 — Discussion: 2022-01-23  GigaScience
ShinyLearner: A containerized benchmarking tool for machine-learning classification of tabular data
Piccolo, S. R., Lee, T. J., Suh, E., Hill, K.
10.1101/675181 — Posted: 2019-06-19 — Discussion: 2022-01-23  GigaScience
Discovering Data Access and Use Requirements Using the Data Tags Suite (DATS) Model
Alter, G., Gonzalez-Beltran, A., Ohno-Machado, L., Rocca-Serra, P.
10.1101/518571 — Posted: 2019-01-11 — Discussion: 2022-01-23  GigaScience
Laniakea: an open solution to provide Galaxy \"on-demand\" instances over heterogeneous cloud infrastructures.
Tangaro, M. A., Donvito, G., Antonacci, M., Chiara, M., Mandreoli, P., Pesole, G., Zambelli, F.
10.1101/472464 — Posted: 2018-11-19 — Discussion: 2022-01-23  GigaScience
HAMAP rules as SPARQL - A portable annotation pipeline for genomes and proteomes
Bolleman, J., de Castro, E., Baratin, D., Gehant, S., Cuche, B. A., Auchincloss, A., COUDERT, E., Hulo, C., Masson, P., Pedruzzi, I., Rivoire, C., Xenarios, I., Redaschi, N., Bridge, A.
10.1101/615294 — Posted: 2019-04-24 — Discussion: 2022-01-23  GigaScience

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