bioRxiv/medRxiv TRiP Review Activity

102 Reviews — GigaScience — Genomics

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Chromosome-scale assemblies reveal the structural evolution of African cichlid genomes
Conte, M. A., Joshi, R., Moore, E. C., Nandamuri, S. P., Gammerdinger, W. J., Roberts, R. B., Carleton, K. L., Lien, S., Kocher, T. D.
10.1101/383992 — Posted: 2018-08-03 — Discussion: 2022-01-23  GigaScience
Evaluating the Genome and Resistome of Extensively Drug-Resistant Klebsiella pneumoniae using Native DNA and RNA Nanopore Sequencing
Pitt, M., Nguyen, S. H. H., Duarte, T. P. S., Blaskovich, M., Cooper, M., Coin, L.
10.1101/482661 — Posted: 2018-11-29 — Discussion: 2022-01-23  GigaScience
A haplotype-resolved draft genome of the European sardine (Sardina pilchardus)
Louro, B., De Moro, G., Garcia, C. M. E. V. R., Cox, C., Verissimo, A., Sabatino, S. J., Santos, A. M., Canario, A. V. M.
10.1101/441774 — Posted: 2018-10-13 — Discussion: 2022-01-23  GigaScience
A critical comparison of technologies for a plant genome sequencing project
Paajanen, P., Kettleborough, G., Lopez-Girona, E., Giolai, M., Heavens, D., Baker, D., Lister, A., Wilde, G., Hein, I., Macaulay, I., Bryan, G. J., Clark, M. D.
10.1101/201830 — Posted: 2017-10-11 — Discussion: 2022-01-23  GigaScience
Multifaceted Hi-C benchmarking: what makes a difference in chromosome-scale genome scaffolding?
Kadota, M., Nishimura, O., Miura, H., Tanaka, K., Hiratani, I., Kuraku, S.
10.1101/659623 — Posted: 2019-06-07 — Discussion: 2022-01-23  GigaScience
Integrating genomic resources to present full gene and promoter capture probe sets for bread wheat
Gardiner, L.-J., Brabbs, T., Akhunova, A., Jordan, K., Budak, H., Richmond, T., Singh, S., Catchpole, L., Akhunov, E., Hall, A.
10.1101/363663 — Posted: 2018-07-06 — Discussion: 2022-01-23  GigaScience
Genome sequence of the corn leaf aphid (Rhopalosiphum maidis Fitch)
Chen, W., Shakir, S., Bigham, M., Fei, Z., Jander, G.
10.1101/438499 — Posted: 2018-10-22 — Discussion: 2022-01-23  GigaScience
Trochodendron aralioides, the first chromosome-level draft genome in Trochodendrales and a valuable resource for basal eudicot research
Strijk, J. S., Hinsinger, D. D., Zhang, F.-P., Cao, K.
10.1101/650424 — Posted: 2019-05-26 — Discussion: 2022-01-23  GigaScience
Single-cell Transcriptomic Landscape of Nucleated Cells in Umbilical Cord Blood
Zhao, Y., Li, X., Wang, J., Wan, Z., Gao, K., Yi, G., Wang, X., Wu, J., Fan, B., Zhang, W., Chen, F., Yang, H., Wang, J., Xu, X., Li, B., Liu, S., Zhao, W., Hou, Y., Liu, X.
10.1101/346106 — Posted: 2018-06-13 — Discussion: 2022-01-23  GigaScience
A Hybrid de novo Assembly of the Sea Pansy (Renilla muelleri) Genome
Jiang, J., Quattrini, A. M., Francis, W. R., Ryan, J. F., Rodriguez, E., McFadden, C. S.
10.1101/424614 — Posted: 2018-09-23 — Discussion: 2022-01-23  GigaScience

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