bioRxiv/medRxiv TRiP Review Activity

32 Reviews — Review Commons — Genomics

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OTX2 controls chromatin accessibility to direct somatic versus germline differentiation
Barbieri, E., Chambers, I.
10.1101/2025.02.18.638827 — Posted: 2025-02-18 — Discussion: 2025-05-06  Review Commons
Transcription can be sufficient, but is not necessary, to advance replication timing
Vouzas, A., Sasaki, T., Rivera-Mulia, J. C., Turner, J. L., Brown, A. N., Alexander, K. E., Brueckner, L., van Steensel, B., Gilbert, D. M.
10.1101/2025.02.04.636516 — Posted: 2025-02-05 — Discussion: 2025-05-06  Review Commons
DNMT1 loss leads to hypermethylation of a subset of late replicating domains by DNMT3A
Kafetzopoulos, I., Taglini, F., Davidson-Smith, H., Sproul, D.
10.1101/2024.12.19.629414 — Posted: 2024-12-19 — Discussion: 2025-04-14  Review Commons
Hypoxia impedes differentiation of cranial neural crest cells into derivatives relevant for craniofacial development
Schmid, T., Rodrian, G., Kohler, A., Wegner, M., Goelz, L., Weider, M.
10.1101/2024.09.10.610634 — Posted: 2024-09-11 — Discussion: 2025-03-27  Review Commons
Essentiality and dynamic expression of the human tRNA pool during viral infection
Aharon-Hefetz, N., Schwartz, M., Dahan, O., Stern-Ginossar, N., Pilpel, Y.
10.1101/2024.04.25.591047 — Posted: 2024-04-30 — Discussion: 2024-09-05  Review Commons
Recurrent loss of crossover interference punctuates the recombination landscape across yeast species
Dutta, A., Dutreux, F., Garin, M., Caradec, C., Friedrich, A., Brach, G., Thiele, P., llorente, b., Schacherer, J.
10.1101/2024.02.13.580081 — Posted: 2024-02-15 — Discussion: 2024-07-04  Review Commons
The whole blood microbiome of Indonesians reveals that environmental differences shape immune gene expression signatures
Bobowik, K. S., Darusalam, C., Kusuma, P., Sudoyo, H., Febinia, C. A., Malik, S., Wells, C., Gallego Romero, I.
10.1101/2022.04.24.489025 — Posted: 2022-04-25 — Discussion: 2024-06-14  Review Commons
The GC-content at the 5'ends of human protein-coding genes is undergoing mutational decay
Qiu, Y., Kang, Y. M., Korfmann, C., Pouyet, F., Eckford, A., Palazzo, A. F.
10.1101/2024.03.12.584636 — Posted: 2024-03-14 — Discussion: 2024-05-21  Review Commons
Integrated multiplexed assays of variant effect reveal cis-regulatory determinants of catechol-O-methyltransferase gene expression
Hoskins, I., Rao, S., Tante, C., Cenik, C.
10.1101/2023.08.02.551517 — Posted: 2023-08-05 — Discussion: 2024-03-18  Review Commons
Transcription decouples estrogen-dependent changes in enhancer-promoter contact frequencies and physical proximity
Gomez Acuna, L. I., Flyamer, I., Boyle, S., Friman, E. T., Bickmore, W. A.
10.1101/2023.03.29.534720 — Posted: 2023-03-29 — Discussion: 2024-03-18  Review Commons

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