bioRxiv/medRxiv TRiP Review Activity

38 Reviews — Review Commons — Genomics

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Transcriptional perturbation of LINE-1 elements reveals their cis-regulatory potential
Perez-Rico, Y. A., Bousard, A., Misikova, L. H., Mulugeta, E., de Almeida, S. F., Muotri, A. R., Heard, E., Gendrel, A.-V.
10.1101/2024.02.20.581275 — Posted: 2024-02-20 — Discussion: 2026-03-11  Review Commons
Nuclear genome profiling of two Mexican orchids of the genus Epidendrum
Alcala-Gaxiola, M. A., Salazar, G. A., Hagsater, E., Flores-Iniestres, M. A., Cabrera, L. I., Avina-Rivera, A. I., Mercado-Ruaro, P., Magallon, S., Mendoza, C. G., Nunez-Ruiz, A., Soldevila, G., Urrutia, A., Meza-Lazaro, R. N.
10.1101/2025.09.17.675454 — Posted: 2025-09-20 — Discussion: 2026-02-07  Review Commons
Mechanistic dissection of GRHL2 and PR transcriptional co-regulation in breast cells
Aarts, M. T., Nordin, A., Cantu, C., van Boxtel, A. L., van Amerongen, R.
10.1101/2025.09.01.673508 — Posted: 2025-09-05 — Discussion: 2025-12-08  Review Commons
Beyond the transcript: chromatin implications in trans-splicing in Trypanosomatids
Zambrano Siri, R. T., Beati, P., Inchausti, L., Smircich, P., Alonso, G. D., Ocampo, J.
10.1101/2025.07.08.663533 — Posted: 2025-07-11 — Discussion: 2025-12-02  Review Commons
Conservation of chromatin states and their association with transcription factors in land plants
Shukla, V., Axelsson, E., Hisanaga, T., Haseloff, J., Romani, F., Berger, F.
10.1101/2025.07.12.664529 — Posted: 2025-07-17 — Discussion: 2025-11-03  Review Commons
OTX2 controls chromatin accessibility to direct somatic versus germline differentiation
Barbieri, E., Chambers, I.
10.1101/2025.02.18.638827 — Posted: 2025-02-18 — Discussion: 2025-05-06  Review Commons
Transcription can be sufficient, but is not necessary, to advance replication timing
Vouzas, A., Sasaki, T., Rivera-Mulia, J. C., Turner, J. L., Brown, A. N., Alexander, K. E., Brueckner, L., van Steensel, B., Gilbert, D. M.
10.1101/2025.02.04.636516 — Posted: 2025-02-05 — Discussion: 2025-05-06  Review Commons
DNMT1 loss leads to hypermethylation of a subset of late replicating domains by DNMT3A
Kafetzopoulos, I., Taglini, F., Davidson-Smith, H., Sproul, D.
10.1101/2024.12.19.629414 — Posted: 2024-12-19 — Discussion: 2025-04-14  Review Commons
Hypoxia impedes differentiation of cranial neural crest cells into derivatives relevant for craniofacial development
Schmid, T., Rodrian, G., Kohler, A., Wegner, M., Goelz, L., Weider, M.
10.1101/2024.09.10.610634 — Posted: 2024-09-11 — Discussion: 2025-03-27  Review Commons
Essentiality and dynamic expression of the human tRNA pool during viral infection
Aharon-Hefetz, N., Schwartz, M., Dahan, O., Stern-Ginossar, N., Pilpel, Y.
10.1101/2024.04.25.591047 — Posted: 2024-04-30 — Discussion: 2024-09-05  Review Commons

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