Channel:  4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

426 Articles

Concerted localization resets precede YAP-dependent transcription
Ghosh, R. P., Franklin, J. M., Shi, Q., Reddick, M. P., Liphardt, J. T.
10.1101/539049 — Posted: 2020-04-05
EpiAlignment: alignment with both DNA sequence and epigenomic data
Lu, J., Cao, X., Zhong, S.
10.1101/562199 — Posted: 2019-02-27
Gene networks with transcriptional bursting recapitulate rare transient coordinated expression states in cancer
Schuh, L., Saint-Antoine, M., Sanford, E., Emert, B., Singh, A., Marr, C., Goyal, Y., Raj, A.
10.1101/704247 — Posted: 2019-07-18
Chromatin is frequently unknotted at the megabase scale
Goundaroulis, D., Aiden, E. L., Stasiak, A.
10.1101/762872 — Posted: 2019-09-09
Temporal-Spatial Visualization of Endogenous Chromosome Rearrangements in Living Cells
Wang, H., Nakamura, M., Zhao, D., Nguyen, C. M., Yu, C., Lo, A., Daley, T., La Russa, M., Liu, Y., Qi, L. S.
10.1101/734483 — Posted: 2019-08-14
ChIA-PIPE: A fully automated pipeline for ChIA-PET data analysis and visualization
Capurso, D., Wang, J., Tian, S. Z., Cai, L., Namburi, S., Lee, B., Tjong, H., Tang, Z., Wang, P., Wei, C.-L., Ruan, Y., Li, S.
10.1101/506683 — Posted: 2018-12-27
Effects of altering histone post-translational modifications on mitotic chromosome structure and mechanics
Biggs, R., Stephens, A. D., Liu, P., Marko, J. F.
10.1101/423541 — Posted: 2019-01-04
The accessible chromatin landscape of the hippocampus at single-cell resolution
Sinnamon, J. R., Torkenczy, K. A., Linhoff, M. W., Vitak, S. A., Pliner, H. A., Trapnell, C., Steemers, F. J., Mandel, G., Adey, A. C.
10.1101/407668 — Posted: 2018-09-04
Predicting CTCF-mediated chromatin loops using CTCF-MP
Zhang, R., Wang, Y., Yang, Y., Zhang, Y., Ma, J.
10.1101/259416 — Posted: 2018-02-02
RTFBSDB: an integrated framework for transcription factor binding site analysis
Zhong Wang, Andre L Martins, Charles G Danko
10.1101/036053 — Posted: 2016-01-06

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