Channel: 4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

467 Articles

A multi-looping chromatin signature predicts dysregulated gene expression in neurons with familial Alzheimer's disease mutations

Chandrashekar, H., Simandi, Z., Choi, H., Ryu, H.-S., Waldman, A. J., Nikish, A., Muppidi, S. S., Gong, W., Paquet, D., Phillips-Cremins, J. E.

10.1101/2024.02.27.582395 — Posted: 2024-02-27

Induction and in silico staging of human gastruloids with neural tube, segmented somites & advanced cell types

Hamazaki, N., Yang, W., Kubo, C., Qiu, C., Martin, B. K., Garge, R. K., Regalado, S. G., Nichols, E., Lee, C., Daza, R. M., Srivatsan, S., Shendure, J.

10.1101/2024.02.10.579769 — Posted: 2024-02-12

HiCDiffusion - diffusion-enhanced, transformer-based prediction of chromatin interactions from DNA sequences

Chilinski, M., Plewczynski, D.

10.1101/2024.02.01.578389 — Posted: 2024-02-05

Mitotic chromosomes are self-entangled and disentangle through a Topoisomerase II-dependent two stage exit from mitosis

Hildebrand, E. M., Polovnikov, K., Dekker, B., Liu, Y., Lafontaine, D. L., Fox, A. N., Li, Y., Venev, S. V., Mirny, L. A., Dekker, J.

10.1101/2022.10.15.511838 — Posted: 2024-01-30

Pseudotime analysis for time-series single-cell sequencing and imaging data

Li, G., Kim, H.-J., Pendyala, S., Zhang, R., Disteche, C. M., Vert, J.-P., Deng, X., Fowler, D. M., Noble, W. S.

10.1101/2023.11.03.565575 — Posted: 2024-01-26

Rapid and reversible dissolution of biomolecular condensates using light-controlled recruitment of a solubility tag

Brumbaugh-Reed, E. H., Aoki, K., Toettcher, J. E.