Channel:  4D Nucleome

484 Articles

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Pervasive and programmed nucleosome distortion patterns on single mammalian chromatin fibers
Yang, M. G., Richter, H. J., Wang, S., McNally, C. P., Harris, N., Dhillon, S., Maresca, M., de Wit, E., Willenbring, H., Maher, J., Goodarzi, H., Ramani, V.
10.1101/2025.01.17.633622 — Posted: 2025-01-22
Telomeric SUMO level influences the choices of APB formation pathways and ALT efficiency
Zhao, R., Wivagg, A., Lackner, R. M., Salsman, J., Dellaire, G., Matunis, M. J., Chenoweth, D. M., Zhao, X., Zhang, H.
10.1101/2025.01.16.633463 — Posted: 2025-01-20
Piscis: a novel loss estimator of the F1 score enables accurate spot detection in fluorescence microscopy images via deep learning
Niu, Z., O'Farrell, A., Li, J., Reffsin, S., Jain, N., Dardani, I., Goyal, Y., Raj, A.
10.1101/2024.01.31.578123 — Posted: 2025-01-15
DANGO: Predicting higher-order genetic interactions
Zhang, R., Bafna, M., Ma, J., Ma, J.
10.1101/2020.11.26.400739 — Posted: 2025-01-13
Dose-dependent sensitivity of human 3D chromatin to a heart disease-linked transcription factor
Grant, Z. L., Kuang, S., Zhang, S., Horrillo, A. J., Rao, K. S., Kameswaran, V., Joubran, C., Lau, P. K., Dong, K., Yang, B., Bartosik, W. M., Zemke, N. R., Ren, B., Kathiriya, I. S., Pollard, K. S., Bruneau, B. G.
10.1101/2025.01.09.632202 — Posted: 2025-01-12
Distinct Control of histone H1 expression within the Histone Locus body by CRAMP1
Bodner, J., Vadlamani, P., Helmin, K. A., Liu, Q., Mendillo, M. L., Singer, B. D., Srivastava, S., Foltz, D. R.
10.1101/2025.01.07.631602 — Posted: 2025-01-08
In vivo measurements of receptor tyrosine kinase activity reveal feedback regulation of a developmental gradient
Ho, E. K., Kim-Yip, R. P., Simpkins, A. G., Farahani, P. E., Oatman, H. R., Posfai, E., Shvartsman, S. Y., Toettcher, J. E.
10.1101/2025.01.06.631605 — Posted: 2025-01-07
Discovery of NANOG enhancers and their essential roles in self-renewal and differentiation in human embryonic stem cells
Yan, J., Luo, R., Rosen, B. P., Liu, D., Wong, W., Leslie, C. S., Huangfu, D.
10.1101/2024.12.21.628413 — Posted: 2024-12-21
De novo structural variants in autism spectrum disorder disrupt distal regulatory interactions of neuronal genes
Gjoni, K., Ren, X., Everitt, A., Shen, Y., Pollard, K. S.
10.1101/2024.11.06.621353 — Posted: 2024-11-07
An integrated view of the structure and function of the human 4D nucleome
The 4D Nucleome Consortium, , Dekker, J., Oksuz, B. A., Zhang, Y., Wang, Y., Minsk, M. K., Kuang, S., Yang, L., Gibcus, J. H., Krietenstein, N., Rando, O., Xu, J., Janssens, D. H., Henikoff, S., Kukalev, A., Willemin, A., Winick-Ng, W., Kempfer, R., Pombo, A., Yu, M., Kumar, P., Zhang, L., Belmont, A. S., Sasaki, T., van Schaik, T., Brueckner, L., Peric-Hupkes, D., van Steensel, B., Wang, P., Chai, H., Kim, M., Ruan, Y., Zhang, R., Quinodoz, S. A., Bhat, P., Guttman, M., Zhao, W., Chien, S., Liu, Y., Venev, S. V., Plewczynski, D., Irastorza Azcarate, I., Szabo, D., Thieme, C. J., Szczepinska
10.1101/2024.09.17.613111 — Posted: 2024-10-27

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