Channel:  4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

467 Articles

LDB1 establishes multi-enhancer networks to regulate gene expression
Aboreden, N. G., Lam, J. C., Goel, V. Y., Wang, S., Wang, X., Midla, S. C., Quijano, A., Keller, C. A., Giardine, B. M., Hardison, R. C., Zhang, H., Hansen, A. S., Blobel, G.
10.1101/2024.08.23.609430 — Posted: 2024-08-24
YAP charge patterning mediates signal integration through transcriptional co-condensates
Meyer, K., Yserentant, K., Cheloor-Kovilakam, R., Ruff, K. M., Chung, C.-I., Shu, X., Huang, B., Weiner, O. D.
10.1101/2024.08.10.607443 — Posted: 2024-08-10
Multiscale Molecular Modelling of Chromatin with MultiMM: From Nucleosomes to the Whole Genome
Korsak, S., Banecki, K., Plewczynski, D.
10.1101/2024.07.26.605260 — Posted: 2024-07-26
ConsensuSV-ONT - a modern method for accurate structural variant calling
Pietryga, A., Chilinski, M., Gadakh, S., Plewczynski, D.
10.1101/2024.07.26.605267 — Posted: 2024-07-26
AP-1 Mediates Cellular Adaptation and Memory Formation During Therapy Resistance
Li, J., Ravindran, P. T., O'Farrell, A., Busch, G. T., Boe, R. H., Niu, Z., Woo, S., Dunagin, M. C., Jain, N., Goyal, Y., Sarma, K., Herlyn, M., Raj, A.
10.1101/2024.07.25.604999 — Posted: 2024-07-25
Long range regulation of transcription scales with genomic distance in a gene specific manner
Jensen, C. L., Chen, L.-F., Swigut, T., Crocker, O. J., Yao, D., Bassik, M. C., Ferrell, J., Boettiger, A., Wysocka, J.
10.1101/2024.07.19.604327 — Posted: 2024-07-19
Vcam1+ Fibro-adipogenic Progenitors Mark Fatty Infiltration in Chronic Limb Threatening Ischemia
Dai, Q., Wan, C., Xu, Y., Fei, K., Olivere, L. A., Garrett, B., Akers, L., Peters, D., Otto, J. C., Kontos, C. D., Ji, Z., Diao, Y., Southerland, K. W.
10.1101/2024.07.08.602430 — Posted: 2024-07-11
Efficient Genome Editing with Chimeric Oligonucleotide-Directed Editing
Nguyen, L. T., Rakestraw, N. R., Pizzano, B. L. M., Young, C. B., Huang, Y., Beerensson, K. T., Fang, A., Antal, S. G., Anamiss, K. V., Peggs, C. M. D., Yan, J., Jing, Y., Burdine, R. D., Adamson, B., Toettcher, J. E., Myhrvold, C., Jain, P. K.
10.1101/2024.07.09.602710 — Posted: 2024-07-10
Prediction of single-cell chromatin compartments from single-cell chromosome structures by MaxComp
Zhan, Y., Musella, F., Alber, F.
10.1101/2024.07.02.600897 — Posted: 2024-07-04
Spatial transcriptomics reveals influence of microenvironment on intrinsic fates in melanoma therapy resistance
Boe, R. H., Triandafillou, C. G., Lazcano, R., Wargo, J. A., Raj, A.
10.1101/2024.06.30.601416 — Posted: 2024-07-02

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