Channel:  4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

451 Articles

Improving the sensitivity of in vivo CRISPR off-target detection with DISCOVER-Seq+
Zou, R. S., Liu, Y., Reyes Gaido, O. E., Konig, M. F., Mog, B. J., Shen, L. L., Aviles-Vazquez, F., Marin-Gonzalez, A., Ha, T.
10.1101/2022.10.29.514376 — Posted: 2022-10-30
Structural elements facilitate extreme long-range gene regulation at a human disease locus
Chen, L.-F., Long, H. K., Park, M., Swigut, T., Boettiger, A. N., Wysocka, J.
10.1101/2022.10.20.513057 — Posted: 2022-10-21
Remodeling and compaction of the inactive X is regulated by Xist during female B cell activation
Anguera, M., Sierra, I., Nguyen, S. C., Barnett, R. J., Cook, A., Ryu, H.-S., Beethem, Z., Phillips-Cremins, J. E., Joyce, E. F.
10.1101/2022.10.19.512821 — Posted: 2022-10-21
Polycomb repression of Hox genes involves spatial feedback but not domain compaction or demixing
Murphy, S. E., Boettiger, A.
10.1101/2022.10.14.512199 — Posted: 2022-10-14
Identification of a self-renewing muscle satellite cell state by single-cell chromatin accessibility profiling
Okafor, A. E., Lin, X., Situ, C., Wei, X., Wei, X., Wu, Z., Diao, Y.
10.1101/2022.09.16.508339 — Posted: 2022-09-17
Crosstalk between RNA m6A and DNA methylation regulates transposable element chromatin activation and cell fate in human pluripotent stem cells
Sun, T., Xu, Y., Xiang, Y., Soderblom, E. J., Diao, Y.
10.1101/2022.09.08.507172 — Posted: 2022-09-12
In silico discovery of repetitive elements as key sequence determinants of 3D genome folding
Gunsalus, L. M., Keiser, M. J., Pollard, K. S.
10.1101/2022.08.11.503410 — Posted: 2022-08-12
Loop stacking organizes genome folding from TADs to chromosomes
Hafner, A., Park, M., Berger, S. E., Nora, E., Boettiger, A. N.
10.1101/2022.07.13.499982 — Posted: 2022-07-29
Maf Family Transcription Factors are Required for Nutrient Uptake in the Neonatal Gut
Bara, A. M., Chen, L., Ma, C., Underwood, J., Moreci, R. S., Sumigray, K., Sun, T., Diao, Y., Verzi, M., Lechler, T.
10.1101/2022.07.26.501624 — Posted: 2022-07-28
The dynseq genome browser track enables visualization of context-specific, dynamic DNA sequence features at single nucleotide resolution
Nair, S., Barrett, A., Li, D., Raney, B. J., Lee, B. T., Kerpedjiev, P., Ramalingam, V., Pampari, A., Lekschas, F., Wang, T., Haeussler, M., Kundaje, A.
10.1101/2022.05.26.493621 — Posted: 2022-05-31

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