Channel:  4D Nucleome

476 Articles

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Identification of a self-renewing muscle satellite cell state by single-cell chromatin accessibility profiling
Okafor, A. E., Lin, X., Situ, C., Wei, X., Wei, X., Wu, Z., Diao, Y.
10.1101/2022.09.16.508339 — Posted: 2022-09-17
Crosstalk between RNA m6A and DNA methylation regulates transposable element chromatin activation and cell fate in human pluripotent stem cells
Sun, T., Xu, Y., Xiang, Y., Soderblom, E. J., Diao, Y.
10.1101/2022.09.08.507172 — Posted: 2022-09-12
In silico discovery of repetitive elements as key sequence determinants of 3D genome folding
Gunsalus, L. M., Keiser, M. J., Pollard, K. S.
10.1101/2022.08.11.503410 — Posted: 2022-08-12
Loop stacking organizes genome folding from TADs to chromosomes
Hafner, A., Park, M., Berger, S. E., Nora, E., Boettiger, A. N.
10.1101/2022.07.13.499982 — Posted: 2022-07-29
Maf Family Transcription Factors are Required for Nutrient Uptake in the Neonatal Gut
Bara, A. M., Chen, L., Ma, C., Underwood, J., Moreci, R. S., Sumigray, K., Sun, T., Diao, Y., Verzi, M., Lechler, T.
10.1101/2022.07.26.501624 — Posted: 2022-07-28
The dynseq genome browser track enables visualization of context-specific, dynamic DNA sequence features at single nucleotide resolution
Nair, S., Barrett, A., Li, D., Raney, B. J., Lee, B. T., Kerpedjiev, P., Ramalingam, V., Pampari, A., Lekschas, F., Wang, T., Haeussler, M., Kundaje, A.
10.1101/2022.05.26.493621 — Posted: 2022-05-31
Nucleoli and the nucleoli-centromere association are dynamic during normal development and in cancer
Rodrigues, A., MacQuarrie, K. L., Freeman, E., Willis, A. B., Xu, Z., Alvarez, A. A., Ma, Y., Perez White, B. E., Foltz, D. R., Huang, S.
10.1101/2022.05.21.492846 — Posted: 2022-05-21
The association of MEG3 lncRNA with nuclear speckles in living cells
Hasenson, S., Alkalay, E., Atrash, M. K., Boocholez, A., Gershbaum, J., Hochberg-Laufer, H., Shav-Tal, Y.
10.1101/2022.05.11.491451 — Posted: 2022-05-11
A unique epigenomic landscape defines CD8+ tissue-resident memory T cells
Buquicchio, F. A., Fonseca, R., Belk, J. A., Evrard, M., Obers, A., Qi, Y., Daniel, B., Yost, K. E., Satpathy, A. T., Mackay, L. K.
10.1101/2022.05.04.490680 — Posted: 2022-05-06
Multi-scale phase separation by explosive percolation with single chromatin loop resolution
Sengupta, K., Denkiewicz, M., Chilinski, M., Szczepinska, T., Mollah, A. F., Korsak, S., D'Souza, R., Ruan, Y., Plewczynski, D.
10.1101/2022.04.28.489670 — Posted: 2022-04-29

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