bioRxiv/medRxiv TRiP Review Activity

416 Reviews — GigaScience — All Subjects

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CAT - A Computational Anatomy Toolbox for the Analysis of Structural MRI Data
Gaser, C., Dahnke, R., Thompson, P. M., Kurth, F., Luders, E.
10.1101/2022.06.11.495736 — Posted: 2022-06-13 — Discussion: 2024-08-12  GigaScience
Deciphering Cancer Genomes with GenomeSpy: A Grammar-Based Visualization Toolkit
Lavikka, K., Oikkonen, J., Li, Y., Muranen, T., Micoli, G., Marchi, G., Lahtinen, A., Huhtinen, K., Lehtonen, R., Hietanen, S., Hynninen, J., Virtanen, A., Hautaniemi, S.
10.1101/2023.10.06.561159 — Posted: 2023-10-06 — Discussion: 2024-08-12  GigaScience
Impact of reference design on estimating SARS-CoV-2 lineage abundances from wastewater sequencing data
Assmann, E., Agrawal, S., Orschler, L., Böttcher, S., Lackner, S., Hölzer, M.
10.1101/2023.06.02.543047 — Posted: 2023-06-02 — Discussion: 2024-08-12  GigaScience
MOBFinder: a tool for MOB typing for plasmid metagenomic fragments based on language model
Feng, T., Wu, S., Zhou, H., Fang, Z.
10.1101/2023.12.06.570414 — Posted: 2023-12-07 — Discussion: 2024-08-12  GigaScience
PEPhub: a database, web interface, and API for editing, sharing, and validating biological sample metadata
LeRoy, N. J., Khoroshevskyi, O., O'Brien, A., Stepien, R., Arslan, A., Sheffield, N. C.
10.1101/2023.08.15.551388 — Posted: 2023-08-18 — Discussion: 2024-07-31  GigaScience
Robust clustering of transcriptomes through multiple testing
Kariotis, S., Tan, P. F., Lu, H., Rhodes, C. J., Wilkins, M. R., Lawrie, A., Wang, D.
10.1101/2022.12.19.519427 — Posted: 2022-12-20 — Discussion: 2024-07-31  GigaScience
gNOMO2: a comprehensive and modular pipeline for integrated multi-omics analyses of microbiomes
Arıkan, M., Muth, T.
10.1101/2023.12.03.569767 — Posted: 2023-12-05 — Discussion: 2024-07-31  GigaScience
Unveiling Vertebrate Development Dynamics in Frog Xenopus laevis using Micro-CT Imaging
Laznovsky, J., Kavkova, M., Reis, A., Robovska-Havelkova, P., Krivanek, J., Zikmund, T., Kaiser, J., Buchtova, M., Harnos, J.
10.1101/2024.06.11.598452 — Posted: 2024-06-11 — Discussion: 2024-07-31  GigaScience
ntsm: an alignment-free, ultra low coverage, sequencing technology agnostic, intraspecies sample comparison tool for sample swap detection
Chu, J., Rong, J., Feng, X., Li, H.
10.1101/2023.11.01.565041 — Posted: 2023-11-03 — Discussion: 2024-07-01  GigaScience
Exploring polymorphic interspecies structural variants in Eucalyptus: Unravelling Their Role in Reproductive Isolation and Adaptive Divergence.
Ferguson, S., Jones, A., Murray, K. D., Andrew, R. L., Bothwell, H., Schwessinger, B., Borevitz, J. O.
10.1101/2023.10.20.563207 — Posted: 2023-10-21 — Discussion: 2024-07-01  GigaScience

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