bioRxiv/medRxiv TRiP Review Activity

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Graph-Regularized Optimal Transport for Single-Cell Data Integration
Wang, Z., Zhan, Q., Shen, L.
10.1101/2024.10.30.621072 — Posted: 2024-11-02 — Discussion: 2026-02-24  GigaScience
Single-nucleus multiple-organ chromatin accessibility mapping in the rat
Li, R., Yuan, Y., Duan, S., Deng, Q., Ma, W., Liu, C., Gao, P., Lu, L., Liu, C.
10.1101/2024.11.11.622900 — Posted: 2024-11-11 — Discussion: 2026-02-24  GigaScience
Enhanced semantic classification of microbiome sample origins using Large Language Models (LLMs)
Gaio, D., Tackmann, J., Perez-Molphe-Montoya, E., Napflin, N., Patsch, D., Malfertheiner, L., von Mering, C.
10.1101/2025.04.24.650461 — Posted: 2025-04-27 — Discussion: 2026-02-24  GigaScience
Short chain fatty acids regulate the chromatin landscape and distinct gene expression changes in human colorectal cancer cells
Kabir, T., Connamacher, C. A., Nadeem, Z., Paul, M. R., Smutny, M. R., Lawler, Z. K., Djomo, A. M., Carroll, T., Gates, L. A.
10.1101/2025.05.07.652677 — Posted: 2025-05-13 — Discussion: 2026-02-24  Review Commons
Exposure to polycyclic aromatic hydrocarbons and phthalate diesters in a threatened freshwater turtle Emys orbicularis: effects of age, sex, and temporal variation
Merleau, L.-A., Lourdais, O., Olivier, A., Vittecoq, M., Alliot, F., Traore, S., Leray, C., Goutte, A.
10.1101/2025.06.29.658864 — Posted: 2025-07-04 — Discussion: 2026-02-24  Peer Community In
Improved genome assembly of whale shark, the world's biggest fish: revealing "chromocline" in intragenomic heterogeneity
Kawaguchi, Y. W., Matsumoto, R., Kuraku, S.
10.1101/2025.09.06.674125 — Posted: 2025-09-10 — Discussion: 2026-02-24  GigaScience
Mapping regulatory networks underlying Leishmania stage differentiation reveals an essential role for protein degradation in parasite development
Pescher, P., Douche, T., Giai Gianetto, Q., Druart, K., Kovarova, J., Li, B., Proux, C., Legendre, R., Varet, H., Rajan, K. S., Piel, L., Besse, C., Boland, A., Deleuze, J.-F., Matondo, M., Barrett, M. P., Michaeli, S., Späth, G. F.
10.1101/2025.03.24.644963 — Posted: 2025-03-28 — Discussion: 2026-02-23  Review Commons
Cryo-EM structure of the tetra-phosphorylated R-domain in Ycf1 reveals key interactions for transport regulation
de Carvalho, R. S. A., Rasel, M. S. I., Khandelwal, N. K., Tomasiak, T. M.
10.1101/2024.03.06.583773 — Posted: 2024-03-06 — Discussion: 2026-02-20  EMBO Press
Knowledge, attitude and preventive practices towards scabies infection among mothers of under-five children in Ibadan south-east local government area, oyo state, nigeria.
Adefaka, M. A., Ogunde, G., Oluwasanu, M.
10.1101/2025.10.28.25339030 — Posted: 2025-10-30 — Discussion: 2026-02-19  PLOS Global Public Health
EFFECT OF PNEUMOCOCCAL CONJUGATE VACCINE ON THE LENGTH OF HOSPITALIZATION IN CHILDREN UNDER FIVE WITH PNEUMONIA IN BURKINA FASO
Bountogo, M., Sanogo, B., Da, M., Tall, H., Martin, C., Ouedraogo, W. A., Ouedraogo, A.-S., Betsem, E., Meda, N.
10.1101/2025.11.17.25340457 — Posted: 2025-11-19 — Discussion: 2026-02-19  PLOS Global Public Health

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