bioRxiv/medRxiv TRiP Review Activity

100 Reviews — Gigabyte — All Subjects

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The assembly and annotation of two teinturier grapevine varieties, Dakapo and Rubired
Ritter, E. J., Cochetel, N., Minio, A., Cousins, P., Cantu, D. J., Niederhuth, C.
10.1101/2024.05.03.592245 — Posted: 2024-05-05 — Discussion: 2025-03-17  Gigabyte
Draft Genome of the Endangered Visayan Spotted Deer (Rusa alfredi)
Javier, M. C. F., Noblezada, A. C., Sienes, P. M. Q., Guino-o, R. S., Palomar-Abesamis, N., Malay, M. C. D., del Castillo, C. S., Ferriols, V. M. E. N.
10.1101/2025.02.05.636739 — Posted: 2025-02-06 — Discussion: 2025-03-17  Gigabyte
SqueezeCall: Nanopore basecalling using a Squeezeformer network
Zhu, Z.
10.1101/2025.01.21.634194 — Posted: 2025-01-25 — Discussion: 2025-03-15  Gigabyte
A practical DNA data storage using expanded alphabet introducing 5-methylcytosine
Liu, D., Xu, D., Shi, L., Zhang, J., Bi, K., Luo, B., Liu, C., Li, Y., Fan, G., Wang, W., Ping, Z.
10.1101/2024.12.26.630439 — Posted: 2024-12-26 — Discussion: 2025-02-04  Gigabyte
The genome of the sapphire damselfish Chrysiptera cyanea: a new resource to support further investigation of the evolution of Pomacentrids
Gairin, E., Miura, S., Takamiyagi, H., Herrera, M., Laudet, V.
10.1101/2024.11.06.622371 — Posted: 2024-11-08 — Discussion: 2025-01-08  Gigabyte
Polyploid genome assembly of Cardamine chenopodiifolia
Emonet, A., Awad, M., Tikhomirov, N., Vasilarou, M., Perez-Anton, M., Gan, X., Novikova, P. Y., Hay, A.
10.1101/2024.01.24.576990 — Posted: 2024-01-25 — Discussion: 2025-01-08  Gigabyte
NeuroVar: An Open-source Tool for Gene Expression and Variation Data Visualization for Biomarkers of Neurological Diseases
Aribi, H. B., Abassi, N., Awe, O. I.
10.1101/2024.08.21.609056 — Posted: 2024-08-22 — Discussion: 2024-12-26  Gigabyte
NucBalancer: Streamlining Barcode Sequence Selection for Optimal Sample Pooling for Sequencing
Gupta, S., Sharma, A.
10.1101/2024.09.06.611747 — Posted: 2024-09-12 — Discussion: 2024-11-21  Gigabyte
SMARTER-database: a tool to explore genomic diversity in small ruminants
Cozzi, P., Manunza, A., Ramirez-Diaz, J., Tsartsianidou, V., Gkagkavouzis, K., Peraza, P., Johansson, A. M., Arranz, J. J., Freire, F., Kusza, S., Biscarini, F., Peters, L., Tosser-Klopp, G., Ciappesoni, G., Triantafyllidis, A., Rupp, R., Servin, B., Stella, A.
10.1101/2024.09.01.610681 — Posted: 2024-09-03 — Discussion: 2024-11-21  Gigabyte
Whole-genome re-sequencing of the Baikal seal and other phocid seals for a glimpse into their genetic diversity, demographic history, and phylogeny
Nebenfuehr, M., Arnason, U., Janke, A.
10.1101/2024.10.19.619210 — Posted: 2024-10-22 — Discussion: 2024-11-21  Gigabyte

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