Channel:  4D Nucleome

473 Articles

Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
Popay, T. M., Pant, A., Munting, F., Black, M. E., Haghani, N., Dixon, J.
10.1101/2024.10.02.616323 — Posted: 2024-10-02
Deconvolving organogenesis in space and time via spatial transcriptomics in thick tissues
Asami, S., Yin, C., Garza, L. A., Kalhor, R.
10.1101/2024.09.24.614640 — Posted: 2024-09-24
Dynamics of microcompartment formation at the mitosis-to-G1 transition
Goel, V. Y., Aboreden, N. G., Jusuf, J. M., Zhang, H., Mori, L., Mirny, L. A., Blobel, G., Banigan, E. J., Hansen, A. S.
10.1101/2024.09.16.611917 — Posted: 2024-09-16
ATP-dependent remodeling of chromatin condensates uncovers distinct mesoscale effects of two remodelers
Moore, C. M., Kaur, U., Wong, E., Chio, U. S. M., Zhou, Z., Ostrowski, M., Wu, K., Irkliyenko, I., Wang, S., Ramani, V., Narlikar, G.
10.1101/2024.09.10.611504 — Posted: 2024-09-10
Tracing the evolution of single-cell cancer 3D genomes: an atlas for cancer gene discovery
Liu, M., Jin, S., Agabiti, S. S., Jensen, T. B., Yang, T., Radda, J. S. D., Ruiz, C. F., Baldissera, G., Rajaei, M., Townsend, J. P., Muzumdar, M. D., Wang, S.
10.1101/2023.07.23.550157 — Posted: 2024-09-09
HMGB1 restores a dynamic chromatin environment in the presence of linker histone by deforming nucleosomal DNA
Saunders, H. S., Chio, U. S., Moore, C. M., Ramani, V., Cheng, Y., Narlikar, G.
10.1101/2024.08.23.609244 — Posted: 2024-08-24
LDB1 establishes multi-enhancer networks to regulate gene expression
Aboreden, N. G., Lam, J. C., Goel, V. Y., Wang, S., Wang, X., Midla, S. C., Quijano, A., Keller, C. A., Giardine, B. M., Hardison, R. C., Zhang, H., Hansen, A. S., Blobel, G.
10.1101/2024.08.23.609430 — Posted: 2024-08-24
YAP charge patterning mediates signal integration through transcriptional co-condensates
Meyer, K., Yserentant, K., Cheloor-Kovilakam, R., Ruff, K. M., Chung, C.-I., Shu, X., Huang, B., Weiner, O. D.
10.1101/2024.08.10.607443 — Posted: 2024-08-10
ConsensuSV-ONT - a modern method for accurate structural variant calling
Pietryga, A., Chilinski, M., Gadakh, S., Plewczynski, D.
10.1101/2024.07.26.605267 — Posted: 2024-07-26
Multiscale Molecular Modelling of Chromatin with MultiMM: From Nucleosomes to the Whole Genome
Korsak, S., Banecki, K., Plewczynski, D.
10.1101/2024.07.26.605260 — Posted: 2024-07-26

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