Channel:  4D Nucleome

473 Articles

Ultrafast and interpretable single-cell 3D genome analysis with Fast-Higashi
Zhang, R., Zhou, T., Ma, J.
10.1101/2022.04.18.488683 — Posted: 2022-04-19
Dynamic chromatin organization and regulatory interactions in human endothelial cell differentiation
Alavattam, K. G., Mitzelfelt, K. A., Bonora, G., Fields, P. A., Yang, X., Chiu, H. S., Pabon, L., Bertero, A., Palpant, N. J., Noble, W. S., Murry, C. E.
10.1101/2022.04.15.488491 — Posted: 2022-04-16
SPICEMIX: Integrative single-cell spatial modeling of cell identity
Chidester, B., Zhou, T., Alam, S., Ma, J.
10.1101/2020.11.29.383067 — Posted: 2022-04-14
Reducing peptide sequence bias in quantitative mass spectrometry data with machine learning
Dincer, A. B., Lu, Y., Schweppe, D., Oh, S., Noble, W. S.
10.1101/2022.04.11.487945 — Posted: 2022-04-12
High-throughput Oligopaint screen identifies druggable regulators of genome folding
Park, D. S., Nguyen, S. C., Isenhart, R., Shah, P. P., Kim, W., Barnett, R. J., Chandra, A., Luppino, J. M., Harke, J., Wai, M., Yang, R., Lan, Y., Yoon, S., Yunker, R., Vahedi, G., Phillips-Cremins, J. E., Jain, R., Joyce, E. F.
10.1101/2022.04.08.487672 — Posted: 2022-04-10
A spatial genome aligner for multiplexed DNA-FISH
Jia, B. B., Jussila, A. P., Kern, J. C., Zhu, Q., Ren, B.
10.1101/2022.03.25.485845 — Posted: 2022-03-27
clampFISH 2.0 enables rapid, scalable amplified RNA detection in situ
Dardani, I., Emert, B. L., Goyal, Y., Jiang, C. L., Kaur, A., Lee, J., Rouhanifard, S. H., Alicea, G. M., Fane, M. E., Xiao, M., Herlyn, M., Weeraratna, A. T., Raj, A.
10.1101/2022.03.16.484659 — Posted: 2022-03-17
Cas9-Mediated Knockout of Ndrg2 Enhances the Regenerative Potential of Dendritic Cells for Wound Healing
Henn, D., Zhao, D., Chen, K., Trotsyuk, A., Bonham, C. A., Fischer, K. S., Kehl, T., Fehlmann, T., Sivaraj, D., Greco, A. H., Moortgat Illouz, S. E., Padmanabhan, J., Barrera, J. A., Kneser, U., Lenhof, H.-P., Januszyk, M., Levi, B., Keller, A., Longaker, M. T., Qi, L. S., Gurtner, G. C.
10.1101/2022.03.14.484360 — Posted: 2022-03-15
Nucleome Browser: An integrative and multimodal data navigation platform for 4D Nucleome
Zhu, X., Zhang, Y., Wang, Y., Tian, D., Belmont, A. S., Swedlow, J. R., Ma, J.
10.1101/2022.02.21.481225 — Posted: 2022-02-22
Quantitative fate mapping: Reconstructing progenitor field dynamics via retrospective lineage barcoding
Fang, W., Bell, C. M., Sapirstein, A., Asami, S., Leeper, K., Zack, D. J., Ji, H., Kalhor, R.
10.1101/2022.02.13.480215 — Posted: 2022-02-14

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