Channel:  The Howard Hughes Medical Institute (HHMI)

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RNA sequence design and protein-DNA specificity prediction with NA-MPNN
Kubaney, A., Favor, A. H., McHugh, L., Mitra, R., Pecoraro, R., Dauparas, J., Glasscock, C., Baker, D.
10.1101/2025.10.03.679414 — Posted: 2025-10-08
Timely vaccine strain selection and genomic surveillance improves evolutionary forecast accuracy of seasonal influenza A/H3N2
Huddleston, J., Bedford, T.
10.1101/2024.09.11.24313489 — Posted: 2025-10-07
Disentangling the importance of microbiological and physicochemical properties of Ethiopian field soils for the Striga seed bank and sorghum infestations
Taylor, T., Benti, G., Fernandes Alves Leite, M., Etalo, D., Lombard, L., AriasGiraldo, L.-M., Ryba, D., Sanow, S., Mostert, T., Martinez de la Parte, E., Macia-Vicente, J., Yimer, D., Tsega, U., Daska, J., van Doorn, R., Rosa Leite, R., Tessema, T., Crous, P. W., Kawa, D., Kuramae, E., Raajimakers, J., Brady, S.
10.1101/2025.10.03.680328 — Posted: 2025-10-06
A TCR-mimic bispecific antibody reduces HIV-1 provirus and delays viral rebound in HLA-matched humanized mice
Yuan, Z., Board, N. L., Zhao, M., Zu, G., Sengupta, S., Li, Q., Siliciano, J. D., Siliciano, R. F., Montaner, L. J.
10.1101/2025.10.06.680344 — Posted: 2025-10-06
Population-scale Long-read Sequencing in the All of Us Research Program
Garimella, K. V., Li, Q., Wertz, J., Lee, S. K., Cunial, F., Huang, Y., Mostovoy, Y., Lorig-Roach, R., English, A., Su, H., Levy, S., Muzny, D. M., Berngruber, C., Danzi, M. C., Harvey, W. T., LaPlante, E. L., Patterson, K., Rozanski, A. N., Schwartz, S., Shifaw, B., Wang, Y., Wong, I., Xu, I. R. L., Zaheri, S., Zuchner, S., Zheng, X., Dugan-Perez, S., Izydorczyk, M., Mehta, H., Gibbs, R. A., Lichtenstein, L., Gupta, N., Lennon, N., Gabriel, S., All of Us Research Program Long Read Working Group, , Timp, W., Doheny, K. F., Dutka, T., Musick, A., Wei, C.-L., Sedlazeck, F. J., Schatz, M. C., Ta
10.1101/2025.10.02.25336942 — Posted: 2025-10-05
Actin filament assembly driven by distributive polymerases clustered on membrane surfaces
Mullins, D., Kondev, J., Skruber, K.
10.1101/2024.11.26.625540 — Posted: 2025-10-04
A shared code for perceiving and imagining objects in human ventral temporal cortex
Wadia, V. S., Reed, C. M., Chung, J. M., Bateman, L. M., Mamelak, A. N., Rutishauser, U., Tsao, D. Y.
10.1101/2024.10.05.616828 — Posted: 2025-10-04
Flow Autoencoders are Effective Protein Tokenizers
Dilip, R., Varshney, A., Zhang, E., Van Valen, D. A.
10.1101/2025.10.01.679645 — Posted: 2025-10-03
A regulatory region that controls Wnt gene expression following tissue injury is required for proper muscle regeneration
Logan, C. Y., Lim, X., Fish, M., Mizutani, M., Swain, B., Nusse, R.
10.1101/2025.10.01.679323 — Posted: 2025-10-03
De novo design of RNA and nucleoprotein complexes
Favor, A. H., Quijano, R., Chernova, E., Kubaney, A., Weidle, C., Esler, M. A., McHugh, L., Carr, A., Hsia, Y., Juergens, D., Carr, K. D., Kim, P. T., Politanska, Y., Sehgal, E., Kwon, P. S., Pecoraro, R. J., Glasscock, C., Borst, A. J., DiMaio, F., Stoddard, B. L., Baker, D.
10.1101/2025.10.01.679929 — Posted: 2025-10-02

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