Channel:  Human Cell Atlas

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

152 Articles

A spatial multi-omics atlas of the human lung reveals a novel immune cell survival niche
Madissoon, E., Oliver, A. J., Kleshchevnikov, V., Wilbrey-Clark, A., Polanski, K., Ribeiro Orsi, A. E., Mamanova, L., Bolt, L., Pett, J. P., Huang, N., Elmentaite, R., Richoz, N., He, P., Dabrowska, M., Tuck, E., Prigmore, E., Knights, A., Oszlanczi, A., Hunter, A., Pritchard, S., Vieira, S. F., Patel, M., Mahbubani, K., Georgakopoulos, N., Clatworthy, M., Stegle, O., Bayraktar, O. A., Saeb-Parsy, K., Kumasaka, N., Teichmann, S. A., Meyer, K. B.
10.1101/2021.11.26.470108 — Posted: 2021-11-27
Single-Cell Atlas of Common Variable Immunodeficiency reveals germinal center-associated epigenetic dysregulation in B cell responses
Rodriguez-Ubreva, J., Arutyunyan, A., Bonder, M. J., Del Pino-Molina, L., Clark, S., de la Calle-Fabregat, C., Garcia-Alonso, L., Handfield, L.-F., Ciudad, L., Andres-Leon, E., Krueger, F., Catala-Moll, F., Rodriguez-Cortez, V. C., Polanski, K., Mamanova, L., van Dongen, S., Kiselev, V. Y., Martinez-Saavedra, M. T., Heyn, H., Martin, J., Warnatz, K., Lopez-Granados, E., Rodriguez-Gallego, C., Stegle, O., Kelsey, G. D., Vento-Tormo, R., Ballestar, E.
10.1101/2021.12.20.473453 — Posted: 2021-12-21
Developmental origins of cell heterogeneity in the human lung
Sountoulidis, A., Marco Salas, S., Braun, E., Avenel, C., Bergenstrahle, J., Vicari, M., Czarnewski Barenco, P. V., Theelke, J., Liontos, A., Abalo, X., Andrusivova, Z., Asp, M., Li, X., Hu, L., Sariyar, S., Martinez Casals, A., Ayoglu, B., Firsova, A. B., Michaelsson, J., Lundberg, E., Wählby, C., Sundström, E., Linnarsson, S., Lundeberg, J., Nilsson, M., Samakovlis, C.
10.1101/2022.01.11.475631 — Posted: 2022-01-12
Mapping the developing human immune system across organs
Suo, C., Dann, E., Goh, I., Jardine, L., Kleshchevnikov, V., Park, J.-E., Botting, R. A., Stephenson, E., Engelbert, J., Tuong, Z. K., Polanski, K., Yayon, N., Xu, C., Suchanek, O., Elmentaite, R., Dominguez Conde, C., He, P., Pritchard, S., Miah, M., Moldovan, C., Steemers, A. S., Prete, M., Marioni, J. C., Clatworthy, M. R., Haniffa, M., Teichmann, S. A.
10.1101/2022.01.17.476665 — Posted: 2022-01-18
The Tabula Sapiens: a multiple organ single cell transcriptomic atlas of humans
The Tabula Sapiens Consortium, , Quake, S. R.
10.1101/2021.07.19.452956 — Posted: 2022-03-04
An integrated cell atlas of the human lung in health and disease
Sikkema, L., Strobl, D. C., Zappia, L., Madissoon, E., Markov, N. S., Zaragosi, L.-E., Ansari, M., Arguel, M.-J., Apperloo, L., Becavin, C., Berg, M., Chichelnitskiy, E., Chung, M.-i., Collin, A., Gay, A. C., Hooshiar Kashani, B., Jain, M., Kapellos, T., Kole, T. M., Mayr, C. H., Papen, von, M., Peter, L., Ramirez-Suastegui, C., Schniering, J., Taylor, C. J., Walzthoeni, T., Xu, C., Bui, L. T., Donno, de, C., Dony, L., Guo, M., Gutierrez, A. J., Heumos, L., Huang, N., Ibarra, I. L., Jackson, N. D., Kadur Lakshminarasimha Murthy, P., Lotfollahi, M., Tabib, T., Talavera-Lopez, C., Travaglini, K.
10.1101/2022.03.10.483747 — Posted: 2022-03-11
Raman2RNA: Live-cell label-free prediction of single-cell RNA expression profiles by Raman microscopy
Kobayashi-Kirschvink, K. J., Gaddam, S., James-Sorenson, T., Grody, E., Ounadjela, J. R., Ge, B., Zhang, K., Kang, J. W., Xavier, R., So, P. T. C., Biancalani, T., Shu, J., Regev, A.
10.1101/2021.11.30.470655 — Posted: 2022-05-23
Spatial Transcriptomics-correlated Electron Microscopy
Androvic, P., Schifferer, M., Perez Anderson, K., Cantuti-Castelvetri, L., Ji, H., Liu, L., Besson-Girard, S., Knoferle, J., Simons, M., Gokce, O.
10.1101/2022.05.18.492475 — Posted: 2022-06-27
Single-Cell Transcriptome Analyses Reveal the Cell Diversity and Developmental Features of Human Gastric and Metaplastic Mucosa
Tsubosaka, A., Komura, D., Katoh, H., Kakiuchi, M., Onoyama, T., Yamamoto, A., Abe, H., Seto, Y., Ushiku, T., Ishikawa, S.
10.1101/2022.05.22.493006 — Posted: 2022-08-18
A human fetal lung cell atlas uncovers proximal-distal gradients of differentiation and key regulators of epithelial fates
He, P., Lim, K., Sun, D., Pett, J. P., Jeng, Q., Polanski, K., Dong, Z., Bolt, L., Richardson, L., Mamanova, L., Dabrowska, M., Wilbrey-Clark, A. L., Madissoon, E., Tuong, K. Z., Dann, E., Suo, C., Goh, I., Yoshida, M., Nikolic, M. Z., James, S. M., He, X., Barker, R. A., Teichmann, S., Marioni, J., Meyer, K. B., Rawlins, E. L.
10.1101/2022.01.11.474933 — Posted: 2022-09-30

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