bioRxiv is receiving many new papers on coronavirus SARS-CoV-2.   A reminder: these are preliminary reports that have not been peer-reviewed. They should not be regarded as conclusive, guide clinical practice/health-related behavior, or be reported in news media as established information.

Channel : Human Cell Atlas

47 Articles

Single-cell sequencing of developing human gut reveals transcriptional links to childhood Crohns disease
Elmentaite, R., Ross, A., James, K. R., Ortmann, D., Gomes, T., Roberts, K., Nayak, K., Tuck, L., Bayraktar, O., Heuschkel, R., Vallier, L., Teichmann, S. A., Zilbauer, M.
10.1101/2020.02.06.937110 — Posted: 2020-02-07
Robust clustering and interpretation ofscRNA-seq data using reference componentanalysis
Schmidt, F., Ranjan, B., Xiao Xuan Lin, Q., Krishnan, V., Joanito, I., Honardoost, M. A., Nawaz, Z., Venkatesh, P. N., Tan, J., Rayan, N. A., Ong, S. T., Prabhakar, S.
10.1101/2021.02.16.431527 — Posted: 2021-02-17
Systemic Tissue and Cellular Disruption from SARS-CoV-2 Infection revealed in COVID-19 Autopsies and Spatial Omics Tissue Maps
Park, J., Foox, J., Hether, T., Danko, D., Warren, S., Kim, Y., Reeves, J., Butler, D. J., Mozsary, C., Rosiene, J., Shaiber, A., Afshinnekoo, E., MacKay, M., Bram, Y., Chandar, V., Geiger, H., Craney, A., Velu, P., Melnick, A. M., Hajirasouliha, I., Beheshti, A., Taylor, D., Saravia-Butler, A., Singh, U., Wurtele, E. S., Schisler, J., Fenessey, S., Corvelo, A., Zody, M. C., Germer, S., Salvatore, S., Levy, S., Wu, S., Tatonetti, N., Shapira, S., Salvatore, M., Loda, M., Westblade, L. F., Cushing, M., Rennert, H., Kriegel, A. J., Elemento, O., Imielinski, M., Borczuk, A. C., Meydan, C., Schwar
10.1101/2021.03.08.434433 — Posted: 2021-03-09
A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2
Delorey, T. M., Ziegler, C. G. K., Heimberg, G., Normand, R., Yang, Y., Segerstolpe, A., Abbondanza, D., Fleming, S. J., Subramanian, A., Montoro, D. T., Jagadeesh, K. A., Dey, K., Sen, P., Slyper, M., Pita-Juarez, Y., Phillips, D., Bloom-Ackermann, Z., Barkas, N., Ganna, A., Gomez, J., Normandin, E., Naderi, P., Popov, Y. V., Raju, S. S., Niezen, S., Tsai, L. T.- Y., Siddle, K. J., Sud, M., Tran, V. M., Karuthedath Vellarikkal, S., Amir-Zilberstein, L., Atri, D. S., Beechem, J. M., Brook, O. R., Chen, J., Divakar, P., Dorceus, P., Engreitz, J. M., Essene, A., Fitzgerald, D. M., Fropf, R., Gaz
10.1101/2021.02.25.430130 — Posted: 2021-02-25
Single-cell atlas of human oral mucosa reveals a stromal-neutrophil axis regulating tissue immunity in health and inflammatory disease
Williams, D. W., Greenwell-Wild, T., Brenchley, L., Dutzan, N., Overmiller, A., Sawaya, A. P., Webb, S., Martin, D., Hajishengallis, G., Divaris, K., Morasso, M., Haniffa, M., Moutsopoulos, N. M.
10.1101/2021.04.06.438702 — Posted: 2021-04-07
Cells of the human intestinal tract mapped across space and time
Elmentaite, R., Kumasaka, N., King, H. W., Roberts, K., Dabrowska, M., Pritchard, S., Bolt, L., Vieira, S. F., Mamanova, L., Huang, N., Goh Kai'En, I., Stephenson, E., Engelbert, J., Botting, R. A., Fleming, A., Dann, E., Lisgo, S. N., Katan, M., Leonard, S., Oliver, T. R., Hook, L., Nayak, K., Perrone, F., Campos, L. S., Dominguez Conde, C., Polanski, K., van Dongen, S., Patel, M., Morgan, M., Marioni, J., Bayraktar, O., Meyer, K. B., Zilbauer, M., Uhlig, H., Clatworthy, M. R., Mahbubani, K. T., Saeb-Parsy, K., Haniffa, M. A., James, K. R., Teichmann, S. A.
10.1101/2021.04.07.438755 — Posted: 2021-04-07
Profiling of transcribed cis-regulatory elements in single cells
Moody, J., Kouno, T., Suzuki, A., Shibayama, Y., Terao, C., Chang, J.-C., Lopez-Redondo, F., Yip, C. W., Ando, Y., Yamamoto, K., Carninci, P., Shin, J. W., Hon, C.-C.
10.1101/2021.04.04.438388 — Posted: 2021-04-04

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