Channel:  4D Nucleome

476 Articles

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HiC-ACT: Improved Detection of Chromatin Interactions from Hi-C Data via Aggregated Cauchy Test
Lagler, T. M., Yang, Y., Abnousi, A., Hu, M., Li, Y.
10.1101/2020.10.28.359869 — Posted: 2020-10-29
HiCRep.py: Fast comparison of Hi-C contact matrices in Python
Lin, D., Sanders, J., Noble, W. S.
10.1101/2020.10.27.357756 — Posted: 2020-10-28
DNA-loop extruding SMC complexes can traverse one another in vivo
Brandão, H. B., Ren, Z., Karaboja, X., Mirny, L. A., Wang, X.
10.1101/2020.10.26.356329 — Posted: 2020-10-27
Gene regulation gravitates towards either addition or multiplication when combining the effects of two signals
Sanford, E. M., Emert, B. L., Cote, A., Raj, A.
10.1101/2020.05.26.116962 — Posted: 2020-10-27
Deep learning enables fast and dense single-molecule localization with high accuracy
Speiser, A., Müller, L.-R., Matti, U., Obara, C. J., Legant, W. R., Kreshuk, A., Macke, J. H., Ries, J., Turaga, S. C.
10.1101/2020.10.26.355164 — Posted: 2020-10-26
MCM complexes are barriers that restrict cohesin-mediated loop extrusion
Dequeker, B. J. H., Brandao, H. B., Scherr, M. J., Gassler, J., Powell, S., Gaspar, I., Flyamer, I. M., Tang, W., Stocsits, R., Davidson, I. F., Peters, J.-M., Duderstadt, K. E., Mirny, L. A., Tachibana, K.
10.1101/2020.10.15.340356 — Posted: 2020-10-15
HP1α is a chromatin crosslinker that controls nuclear and mitotic chromosome mechanics
Strom, A. R., Biggs, R. J., Banigan, E. J., Wang, X., Chiu, K., Herman, C., Collado, J., Yue, F., Ritland Politz, J. C., Tait, L. J., Scalzo, D., Telling, A., Groudine, M., Brangwynne, C. P., Marko, J., Stephens, A. D.
10.1101/2020.10.09.331900 — Posted: 2020-10-09
Coarse-Grained Modelling of DNA Plectoneme Pinning in the Presence of Base-Pair Mismatches
Desai, P. R., Brahmachari, S., Marko, J. F., Das, S., Neuman, K. C.
10.1101/2019.12.20.885533 — Posted: 2020-10-04
PYMEVisualize: an open-source tool for exploring 3D super-resolution data
Marin, Z., Graff, M., Barentine, A. E. S., Soeller, C., Chung, K. K. H., Fuentes, L. A., Baddeley, D.
10.1101/2020.09.29.315671 — Posted: 2020-09-30
Homeotic Regulation of Olfactory Receptor Choice via NFI-dependent Heterochromatic Silencing and Genomic Compartmentalization
Bashkirova, E., Monahan, K., Campbell, C. E., Osinski, J. M., Tan, L., Schieren, I., Barnea, G., Xie, S., Gronostajski, R. M., Lomvardas, S.
10.1101/2020.08.30.274035 — Posted: 2020-09-28

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