Channel:  4D Nucleome

476 Articles

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Automated CUT&Tag profiling of chromatin heterogeneity in mixed-lineage leukemia
Janssens, D., Meers, M. P., Wu, S. J., Babaeva, E., Meshinchi, S., Sarthy, J. F., Ahmad, K., Henikoff, S.
10.1101/2020.10.06.328948 — Posted: 2021-03-10
Multiplex-GAM: genome-wide identification of chromatin contacts yields insights not captured by Hi-C
Beagrie, R. A., Thieme, C. J., Annunziatella, C., Baugher, C., Zhang, Y., Schueler, M., Chiariello, A. M., Bianco, S., Kukalev, A., Li, Y., Kempfer, R., Scialdone, A., Welch, L. A., Nicodemi, M., Pombo, A.
10.1101/2020.07.31.230284 — Posted: 2021-03-08
Multiscale and integrative single-cell Hi-C analysis with Higashi
Zhang, R., Zhou, T., Ma, J.
10.1101/2020.12.13.422537 — Posted: 2021-03-04
Polymer physics and machine learning reveal a combinatorial code linking chromatin 3D architecture to 1D epigenetics
Esposito, A., Bianco, S., Chiariello, A. M., Abraham, A., Fiorillo, L., Conte, M., Campanile, R., Nicodemi, M.
10.1101/2021.03.01.433416 — Posted: 2021-03-01
GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data
Markowski, J., Kempfer, R., Kukalev, A., Irastorza-Azcarate, I., Loof, G., Kehr, B., Pombo, A., Rahmann, S., Schwarz, R. F.
10.1101/2020.01.30.927061 — Posted: 2021-02-21
Disruption of nuclear architecture as a cause of COVID-19 induced anosmia
Zazhytska, M., Kodra, A., Hoagland, D. A., Fullard, J., Shayya, H. J., Omer, A., Firestein, S., Gong, Q., Canoll, P., Goldman, J. E., Roussos, P., tenOever, B. R., Overdevest, J. B., Lomvardas, S.
10.1101/2021.02.09.430314 — Posted: 2021-02-09
Genome-wide variability in recombination activity is associated with meiotic chromatin organization
Jin, X., Fudenberg, G., Pollard, K. S.
10.1101/2021.01.06.425599 — Posted: 2021-01-07
Cohesin-mediated loop anchors confine the location of human replication origins
Emerson, D. J., Zhao, P. A., Klein, K., Ge, C., Zhou, L., Sasaki, T., Yang, L., Venvev, S. V., Gibcus, J. H., Dekker, J., Gilbert, D. M., Phillips-Cremins, J. E.
10.1101/2021.01.05.425437 — Posted: 2021-01-06
Chromatin Fiber Folding Represses Transcription and Loop Extrusion in Quiescent Cells
Swygert, S. G., Lin, D., Portillo-Ledesma, S., Lin, P.-Y., Hunt, D. R., Kao, C.-F., Schlick, T., Noble, W. S., Tsukiyama, T.
10.1101/2020.11.24.396713 — Posted: 2021-01-05
Removing unwanted variation between samples in Hi-C experiments
Fletez-Brant, K., Qiu, Y., Gorkin, D. U., Hu, M., Hansen, K. D.
10.1101/214361 — Posted: 2021-01-01

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