Channel:  Arc Institute

41 Articles

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Forecasting viral evolution from phylogenetic trees
Specht, I., Park, S., Chithrananda, S., Driscoll, C. L., Brixi, G., Palacios, J. A., Hie, B. L.
10.64898/2026.08.27.741102 — Posted: 2026-09-05
Branched-chain amino acid fermentation as an alternative mammalian electron sink
Midha, A. D., Chew, B. T. L., Marti-Mateos, Y., Blume, S. Y., Flanigan, W. R., Desousa, B. R., Haribowo, A. G., Poddar, A., Chadha, S., Queliconi, B. B., Barrios, A. M., Traglia, M., Thomas, R., Suzuki, J., Kuroda, M., Altschuler, S. J., Wu, L. F., Paredes, M. F., Anthony, T. G., Lishko, P. V., Jain, I. H.
10.64898/2026.08.24.746737 — Posted: 2026-08-25
BioReason-Pro: Advancing Protein Function Prediction with Multimodal Biological Reasoning
Fallahpour, A., Seyed-Ahmadi, A., Idehpour, P., Ibrahim, O., Choi, B. M. H., Gupta, P., Naimer, J., Zhu, K., Shah, A., Ma, S., Adduri, A., Güloglu, T., Liu, N., Cui, H., Jain, A., de Castro, M., Fallahpour, A., Cembellin-Prieto, A., Stiles, J. S., Nemcko, F., Nevue, A. A., Moon, H. C., Sosnick, L., Markham, O., Duan, H., Lee, M. Y. Y., Salvador, A. F. M., Maddison, C. J., Thaiss, C. A., Ricci-Tam, C., Plosky, B. S., Burke, D. P., Hsu, P. D., Goodarzi, H., Wang, B.
10.64898/2026.03.19.712954 — Posted: 2026-07-19
The Disease Gene THAP12 is a Transcriptional Regulator of Mitochondrial ETC Complex I
Desousa, B. R., Abe, Y., Kampmann, M., Jain, I. H.
10.64898/2026.07.16.738975 — Posted: 2026-07-17
A high-level programming language for generative biology with Proto
Merchant, A., Guo, D., Viggiano, B., Brennan-Almaraz, L., Hurr, E., Mai, T., Yin, P., King, S., Ashley, E., Hie, B.
10.64898/2026.06.22.733870 — Posted: 2026-06-23
Stack: In-Context Learning of Single-Cell Biology
Dong, M., Adduri, A., Gautam, D., Wu, L., Kernick, C., Coons, M. M., Chih, Y.-C., Carpenter, C., Shah, R., Ricci-Tam, C., Tung, P.-Y., Li, N., Dobin, A., Kluger, Y., Burke, D. P., Roth, T., Roohani, Y. H.
10.64898/2026.01.09.698608 — Posted: 2026-06-08
An image-based CRISPR screen reveals splicing-mediated control of HP1α condensates
Wong, M. M.-K., Zhou, S., Carpenter, C., Valbuena, R., Priyadarshini, M., Arya, A., Rizvi, A., Carswell-Crumpton, C., Wileveau, A., Lopez-Lopez, G., Tycko, J., Yao, D., Spees, K., Maynard, J., Bassik, M. C., Goodarzi, H., Sanulli, S.
10.1101/2025.09.21.676939 — Posted: 2026-05-28
A long context RNA foundation model for predicting transcriptome architecture
Saberi, A., Choi, B., Wang, S., Hernandez-Corchado, A., Naghipourfar, M., Namini, A., Ramani, V., Emad, A., Najafabadi, H. S., Goodarzi, H.
10.1101/2024.08.26.609813 — Posted: 2026-04-21
Efficient generation of epitope-targeted de novo antibodies with Germinal
Mille-Fragoso, L. S., Driscoll, C. L., Wang, J. N., Dai, H., Widatalla, T. M., Zhang, J. L., Zhang, X., Rao, B., Feng, L., Hie, B. L., Gao, X. J.
10.1101/2025.09.19.677421 — Posted: 2026-04-15
ENPP1 buffers extracellular cGAMP in brown adipose tissue to limit insulin resistance
Wang, S., Guo, Y., An, W., Lee, M., Li, Y., Sudaryo, V., Grenot, G., Skariah, G., Reghupaty, S. C., Young, S., Bai, X., Svensson, K. J., Li, L.
10.64898/2026.04.12.718013 — Posted: 2026-04-14

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