Channel:  International Human Epigenome Consortium (IHEC)

34 Articles

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Transposable elements impact the human regulatory landscape through cell type specific epigenomic associations
Hyacinthe, J., Bourque, G.
10.1101/2024.08.07.606967 — Posted: 2024-11-19
Epigenomic analysis of hepatocellular carcinoma reveals aberrant cis-regulatory changes and dysregulated retrotransposons with prognostic potentials
Cheng, C. C. Y., Cheung, M. F., Lee, A. Y., Wu, Q., Chow, S. H.-C., Ang, J. Y. J., Riquelme Medina, I., Lo, G., Wu, H., Yang, W., Lai, P. B. S., Yip, K., Cheng, A., Leung, D. C. Y.
10.1101/2024.09.16.613254 — Posted: 2024-09-20
Revisiting Evidence for Epigenetic Control of Alternative Splicing
Manz, Q., List, M.
10.1101/2024.08.30.610315 — Posted: 2024-09-01
ChromBERT: Uncovering Chromatin State Motifs in the Human Genome Using a BERT-based Approach
Lee, S., Lin, C., Chen, C.-Y., Nakato, R.
10.1101/2024.07.25.605219 — Posted: 2024-07-26
Synovial Sarcoma Chromatin Dynamics Reveal a Continuum in SS18:SSX Reprograming
Hofvander, J., Qiu, A., Lee, K., Bilenky, M., Carles, A., Cao, Q., Moksa, M., Steif, J., Su, E., Sotiriou, A., Goytain, A., Hill, L., Singer, S., Andulis, I., Wunder, J., Mertens, F., Banito, A., Jones, K. B., Underhill, T. M., Nielsen, T., Hirst, M.
10.1101/2024.05.14.594262 — Posted: 2024-05-17
EpiSegMix: A Flexible Distribution Hidden Markov Model with Duration Modeling for Chromatin State Discovery
Schmitz, J. E., Aggarwal, N., Laufer, L., Walter, J., Salhab, A., Rahmann, S.
10.1101/2023.09.07.556549 — Posted: 2024-01-19
EpiVar Browser: advanced exploration of epigenomics data under controlled access
Lougheed, D. R., Liu, H., Aracena, K. A., Gregoire, R., Pacis, A., Pastinen, T., Barreiro, L. B., Joly, Y., Bujold, D., Bourque, G.
10.1101/2023.08.03.551309 — Posted: 2023-08-05
Robust chromatin state annotation
Foroozandeh Shahraki, M., Farahbod, M., Libbrecht, M. W.
10.1101/2023.07.15.549175 — Posted: 2023-07-17
Integrative epigenomic and functional characterization assay based annotation of regulatory activity across diverse human cell types
Dincer, T. U., Ernst, J.
10.1101/2023.07.14.549056 — Posted: 2023-07-15
Regulatory roles of three-dimensional structures of chromatin domains
Li, K. Y., Cao, Q., Wang, H., Leung, D. C. Y., Yip, K. Y.
10.1101/2022.07.22.501196 — Posted: 2023-06-01

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