Channel:  International Human Epigenome Consortium (IHEC)

36 Articles

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Pan-cell type continuous chromatin state annotation of all epigenomes from the International Human Epigenome Consortium
Daneshpajouh, H., Moghul, I., Wiese, K. C., Libbrecht, M. W.
10.1101/2025.02.06.636950 — Posted: 2025-11-23
GECSI: Large-scale chromatin state imputation from gene expression
Fu, J., Ernst, J.
10.1101/2025.10.02.679828 — Posted: 2025-10-04
Leveraging the largest harmonized epigenomic data collection for metadata prediction validated and augmented over 350,000 public epigenomic datasets
Raby, J., Frosi, G., White, F., Laperle, J., Jacques, P.-E.
10.1101/2025.09.04.670545 — Posted: 2025-09-04
Integrated flexible DNA methylation-chromatin segmentation modeling enhances epigenomic state annotation
Aggarwal, N., Schmitz, J. E., Laufer, L., Rahmann, S., Walter, J., Salhab, A.
10.1101/2025.07.25.666820 — Posted: 2025-07-29
Epilogos: information-theoretic navigation of multi-tissue functional genomic annotations
Quon, J., Reynolds, A. P., Tripician, N., Rynes, E. T., Teodosiadis, A., Kellis, M., Meuleman, W.
10.1101/2025.06.18.660301 — Posted: 2025-06-23
Harnessing machine learning models for epigenome to transcriptome association studies
Behjati ardakani, F., Ashrafiyan, S., Rumpf, L., Hecker, D., Schulz, M. H.
10.1101/2025.05.09.653095 — Posted: 2025-05-15
Cell type-specific epigenomic variation and its association with genotype in the human breast
Hauduc, A., Steif, J., Bilenky, M., Moksa, M. M., Cao, Q., Ding, S., Eaves, C. J., Hirst, M.
10.1101/2025.04.16.648998 — Posted: 2025-04-20
GIMMEcpg: Global Imputation of Mean CpG MEthylation in Real-time
Moghul, I., Chai, N., Pontikos, N., Hardcastle, A., Herrero, J., Beck, S.
10.1101/2025.03.17.643746 — Posted: 2025-03-18
Systematic comparison of dCas9-based DNA methylation epimodifiers over time indicates efficient on-target and widespread off-target effects
Pahlevan Kakhki, M., Rangani, F., Ewing, E., Starvaggi Cucuzza, C., Zheleznyakova, G., Kalomoiri, M., v, T. V. S., Covacu, R., Andreou, I., Needhamsen, M., Kular, L., Jagodic, M.
10.1101/2025.03.15.641804 — Posted: 2025-03-16
Cell type-specific epigenetic regulatory circuitry of coronary artery disease loci
Hecker, D., Song, X., Baumgarten, N., Diagel, A., Katsaouni, N., Li, L., Li, S., Kumar Maji, R., Behjati Ardakani, F., Ma, L., Tews, D., Wabitsch, M., Björkegren, J. L. M., Schunkert, H., Chen, Z., Schulz, M. H.
10.1101/2025.02.20.639228 — Posted: 2025-02-21

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