Channel:  International Human Epigenome Consortium (IHEC)

34 Articles

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FORGEdb: a tool for identifying candidate functional variants and uncovering target genes and mechanisms for complex diseases.
Breeze, C. E., Haugen, E., Gutierrez-Arcelus, M., Yao, X., Teschendorff, A., Beck, S., Dunham, I., Stamatoyannopoulos, J., Franceschini, N., Machiela, M., Berndt, S.
10.1101/2022.11.14.516365 — Posted: 2023-05-03
A statistical approach to identify regulatory DNA variations
Baumgarten, N., Rumpf, L., Kessler, T., Schulz, M. H.
10.1101/2023.01.31.526404 — Posted: 2023-02-03
Universal chromatin state annotation of the mouse genome
Vu, H. T., Ernst, J.
10.1101/2022.12.19.521116 — Posted: 2022-12-20
The adapted Activity-By-Contact model for enhancer-gene assignment and its application to single-cell data
Hecker, D., Behjati Ardakani, F., Karollus, A., Gagneur, J., Schulz, M. H.
10.1101/2022.01.28.478202 — Posted: 2022-12-17
Chromatin state modeling across individuals reveals global patterns of histone modifications
Zou, J., Ernst, J.
10.1101/2022.08.02.502571 — Posted: 2022-08-03
ChromGene: Gene-Based Modeling of Epigenomic Data
Jaroszewicz, A., Ernst, J.
10.1101/2022.05.24.493345 — Posted: 2022-07-05
TF-COMB - discovering grammar of transcription factor binding sites
Bentsen, M., Heger, V., Schultheis, H., Kuenne, C., Looso, M.
10.1101/2022.06.21.496953 — Posted: 2022-06-22
SARS-CoV-2 impacts the transcriptome and epigenome at the maternal-fetal interface in pregnancy
Gao, L., Mathur, V., Tam, S. K. M., Zhou, X., Cheung, M. F., Chan, L. Y., Estrada-Gutierrez, G., Leung, B. W., Moungmaithong, S., Wang, C. C., Poon, L., Leung, D. C. Y.
10.1101/2022.05.31.494153 — Posted: 2022-05-31
Epigenetic variation impacts ancestry-associated differences in the transcriptional response to influenza infection
Aracena, K. A., Lin, Y.-L., Luo, K., Pacis, A., Gona, S., Mu, Z., Yotova, V., Sindeaux, R., Pramatarova, A., Simon, M.-M., Chen, X., Groza, C., Lougheed, D., Gregoire, R., Brownlee, D., Li, Y., He, X., Bujold, D., Pastinen, T., Bourque, G., Barreiro, L. B.
10.1101/2022.05.10.491413 — Posted: 2022-05-11
Transposable elements are associated with the variable response to influenza infection
Chen, X., Pacis, A. S., Aracena, K. A., Gona, S., Kwan, T., Groza, C., Lin, Y. L., Sindeaux, R. H. M., Yotova, V., Pramatarova, A., Simon, M.-M., Pastinen, T. M., Barreiro, L. B., Bourque, G.
10.1101/2022.05.10.491101 — Posted: 2022-05-10

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