Channel:  Human Pangenome Reference Consortium (HPRC)

166 Articles

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HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads
Nurk, S., Walenz, B. P., Rhie, A., Vollger, M. R., Logsdon, G. A., Grothe, R., Miga, K. H., Eichler, E. E., Phillippy, A. M., Koren, S.
10.1101/2020.03.14.992248 — Posted: 2020-03-19
SDip: A novel graph-based approach to haplotype-aware assembly based structural variant calling in targeted segmental duplications sequencing
Heller, D., Vingron, M., Church, G., Li, H., Garg, S.
10.1101/2020.02.25.964445 — Posted: 2020-02-26
Exploring the coronavirus epidemic using the new WashU Virus Genome Browser
Flynn, J., Purushotham, D., Choudhary, M. N., Zhuo, X., Fan, C., Matt, G., Li, D., Wang, T.
10.1101/2020.02.07.939124 — Posted: 2020-02-11
Co-opted transposons help perpetuate conserved higher-order chromosomal structures
Choudhary, M. N., Friedman, R. Z., Wang, J. T., Jang, H. S., Zhuo, X., Wang, T.
10.1101/485342 — Posted: 2019-10-14
Telomere-to-telomere assembly of a complete human X chromosome
Miga, K. H., Koren, S., Rhie, A., Vollger, M. R., Gershman, A., Bzikadze, A., Brooks, S., Howe, E., Porubsky, D., Logsdon, G. A., Schneider, V. A., Potapova, T., Wood, J., Chow, W., Armstrong, J., Fredrickson, J., Pak, E., Tigyi, K., Kremitzki, M., Markovic, C., Maduro, V., Dutra, A., Bouffard, G. G., Chang, A. M., Hansen, N. F., Thibaud-Nissen, F., Schmitt, A. D., Belton, J.-M., Selvaraj, S., Dennis, M. Y., Soto, D. C., Sahasrabudhe, R., Kaya, G., Quick, J., Loman, N. J., Holmes, N., Loose, M., Surti, U., Risques, R. a., Lindsay, T. A. G., Fulton, R., Hall, I., Paten, B., Howe, K., Timp, W.
10.1101/735928 — Posted: 2019-08-16
A haplotype-aware de novo assembly of related individuals using pedigree graph
Garg, S., Aach, J., Li, H., Durbin, R., Church, G.
10.1101/580159 — Posted: 2019-03-17

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