Channel:  Human Pangenome Reference Consortium (HPRC)

171 Articles

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ChromGene: Gene-Based Modeling of Epigenomic Data
Jaroszewicz, A., Ernst, J.
10.1101/2022.05.24.493345 — Posted: 2022-07-05
The dynseq genome browser track enables visualization of context-specific, dynamic DNA sequence features at single nucleotide resolution
Nair, S., Barrett, A., Li, D., Raney, B. J., Lee, B. T., Kerpedjiev, P., Ramalingam, V., Pampari, A., Lekschas, F., Wang, T., Haeussler, M., Kundaje, A.
10.1101/2022.05.26.493621 — Posted: 2022-05-31
A framework for summarizing chromatin state annotations within and identifying differential annotations across groups of samples
Vu, H. T., Koch, Z., Fiziev, P., Ernst, J.
10.1101/2022.05.08.491094 — Posted: 2022-05-08
Genome-wide CRISPR guide RNA design and specificity analysis with GuideScan2
Schmidt, H., Zhang, M., Mourelatos, H., Sanchez-Rivera, F. J., Lowe, S. W., Ventura, A., Leslie, C. S., Pritykin, Y.
10.1101/2022.05.02.490368 — Posted: 2022-05-03
AGC: Compact representation of assembled genomes
Deorowicz, S., Danek, A., Li, H.
10.1101/2022.04.07.487441 — Posted: 2022-04-07
Concerted modification of nucleotides at functional centers of the ribosome revealed by single-molecule RNA modification profiling
Bailey, A. D., Talkish, J., Ding, H., Igel, H., Duran, A., Mantripragada, S., Paten, B., Ares, M.
10.1101/2021.12.16.472988 — Posted: 2022-03-25
Evolution of transposable element-derived enhancer activity
Du, A. Y., Zhuo, X., Sundaram, V., Jensen, N. O., Chaudhari, H. G., Saccone, N. L., Cohen, B. A., Wang, T.
10.1101/2022.03.16.483999 — Posted: 2022-03-17
Automated assembly of high-quality diploid human reference genomes
Jarvis, E. D., Formenti, G., Rhie, A., Guarracino, A., Yang, C., Wood, J., Tracey, A., Thibaud-Nissen, F., Vollger, M. R., Porubsky, D., Cheng, H., Asri, M., Logsdon, G. A., Carnevali, P., Chaisson, M., Chin, C.-S., Cody, S., Collins, J., Ebert, P., Escalona, M., Fedrigo, O., Fulton, R. S., Fulton, L. L., Garg, S., Ghurye, J., Granat, A., Green, E., Hall, I. M., Harvey, W. H., Hasenfeld, P., Hastie, A., Haukness, M., Jaeger, E. B., Jain, M., Kirsche, M., Kolmogorov, M., Korbel, J. O., Koren, S., Korlach, J., Lee, J., Li, D., Lindsay, T., Lucas, J., Luo, F., Marschall, T., McDaniel, J., Nie, F.
10.1101/2022.03.06.483034 — Posted: 2022-03-10
Heterogeneity of Inflammation-associated Synovial Fibroblasts in Rheumatoid Arthritis and Its Drivers
Smith, M. H., Gao, V. R., Schizas, M., Kochen, A., DiCarlo, E., Goodman, S., Norman, T. M., Donlin, L., Leslie, C. S., Rudensky, A. Y.
10.1101/2022.02.28.482131 — Posted: 2022-03-02
The Transcription Factor Bach2 Negatively Regulates Natural Killer Cell Maturation and Function
Li, S., Bern, M., Miao, B., Inoue, T., Piersma, S. J., Colonna, M., Kurosaki, T., Yokoyama, W. M.
10.1101/2022.02.14.480364 — Posted: 2022-02-14

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