Channel:  Human Pangenome Reference Consortium (HPRC)

171 Articles

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Inversion polymorphism in a complete human genome assembly
Porubsky, D., Harvey, W. T., Rozanski, A. N., Ebler, J., Hoeps, W., Ashraf, H., Hasenfeld, P., Paten, B., Sanders, A. D., Marschall, T., Korbel, J. O., Eichler, E. E.
10.1101/2022.10.06.511148 — Posted: 2022-10-06
Unbiased pangenome graphs
Garrison, E., Guarracino, A.
10.1101/2022.02.14.480413 — Posted: 2022-09-15
GBZ File Format for Pangenome Graphs
Siren, J., Paten, B.
10.1101/2022.07.12.499787 — Posted: 2022-09-06
Optimal gap-affine alignment in O(s) space
Marco-Sola, S., Eizenga, J. M., Guarracino, A., Paten, B., Garrison, E., Moreto, M.
10.1101/2022.04.14.488380 — Posted: 2022-08-17
Chromatin state modeling across individuals reveals global patterns of histone modifications
Zou, J., Ernst, J.
10.1101/2022.08.02.502571 — Posted: 2022-08-03
Constructing founder sets under allelic and non-allelic homologous recombination
Bonnet, K., Marschall, T., Doerr, D.
10.1101/2022.05.27.493721 — Posted: 2022-08-01
Haplotype-aware pantranscriptome analyses using spliced pangenome graphs
Sibbesen, J. A., Eizenga, J. M., Novak, A. M., Siren, J., Chang, X., Garrison, E., Paten, B.
10.1101/2021.03.26.437240 — Posted: 2022-07-21
A Draft Human Pangenome Reference
Liao, W.-W., Asri, M., Ebler, J., Doerr, D., Haukness, M., Hickey, G., Lu, S., Lucas, J. K., Monlong, J., Abel, H. J., Buonaiuto, S., Chang, X. H., Cheng, H., Chu, J., Colonna, V., Eizenga, J. M., Feng, X., Fischer, C., Fulton, R. S., Garg, S., Groza, C., Guarracino, A., Harvey, W. T., Heumos, S., Howe, K., Jain, M., Lu, T.-Y., Markello, C., Martin, F. J., Mitchell, M. W., Munson, K. M., Mwaniki, M. N., Novak, A. M., Olsen, H. E., Pesout, T., Porubsky, D., Prins, P., Sibbesen, J. A., Tomlinson, C., Villani, F., Vollger, M. R., Human Pangenome Reference Consortium, , Bourque, G., Chaisson, M.
10.1101/2022.07.09.499321 — Posted: 2022-07-09
Increased mutation rate and interlocus gene conversion within human segmental duplications.
Vollger, M. R., DeWitt, W. S., Dishuck, P. C., Harvey, W. T., Guitart, X., Goldberg, M. E., Rozanski, A., Lucas, J., Asri, M., The Human Pangenome Reference Consortium, , Munson, K. M., Lewis, A. P., Hoekzema, K., Logsdon, G. A., Porubsky, D., Paten, B., Harris, K., Hsieh, P., Eichler, E. E.
10.1101/2022.07.06.498021 — Posted: 2022-07-07
Gaps and complex structurally variant loci in phased genome assemblies
Porubsky, D., Vollger, M. R., Harvey, W. T., Rozanski, A. N., Ebert, P., Hickey, G., Hasenfeld, P., Sanders, A. D., Stober, C., Human Pangenome Reference Consortium (HPRC), , Korbel, J. O., Paten, B., Marschall, T., Eichler, E. E.
10.1101/2022.07.06.498874 — Posted: 2022-07-06

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