Channel:  Impact of Genomic Variation on Function (IGVF)

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

106 Articles

Integrative single-cell analysis of cardiogenesis identifies developmental trajectories and non-coding mutations in congenital heart disease
Ameen, M., Sundaram, L., Banerjee, A., Shen, M., Kundu, S., Nair, S., Shcherbina, A., Gu, M., Wilson, K. D., Varadarajan, A., Vadgama, N., Balsubramani, A., Wu, J. C., Engreitz, J., Farh, K., Karakikes, I., Wang, K. C., Quertermous, T., Greenleaf, W., Kundaje, A.
10.1101/2022.06.29.498132 — Posted: 2022-06-29
Epo-IGF1R crosstalk expands stress-specific progenitors in regenerative erythropoiesis and myeloproliferative neoplasm
Huang, L., Hsieh, H.-h., Yao, H., Ma, Y., Zhang, Y., Xiao, X., Stephens, H., Chung, S. S., Xu, L., Xu, J., Rampal, R. K.
10.1101/2022.06.27.497649 — Posted: 2022-06-29
ChromGene: Gene-Based Modeling of Epigenomic Data
Jaroszewicz, A., Ernst, J.
10.1101/2022.05.24.493345 — Posted: 2022-07-05
SNP-to-gene linking strategies reveal contributions of enhancer-related and candidate master-regulator genes to autoimmune disease
Dey, K. K., Gazal, S. K., van de Geijn, B., Kim, S. S., Nasser, J., Engreitz, J. M., Price, A.
10.1101/2020.09.02.279059 — Posted: 2022-07-15
PerturbNet predicts single-cell responses to unseen chemical and genetic perturbations
Yu, H., Welch, J. D.
10.1101/2022.07.20.500854 — Posted: 2022-07-22
Dynamic states of cervical epithelia during pregnancy and epithelial barrier disruption
Cooley, A., Madhukaran, S., Stroebele, E., Caraballo, M. C., Wang, L., Hon, G., Mahendroo, M.
10.1101/2022.07.26.501609 — Posted: 2022-07-28
Chromatin state modeling across individuals reveals global patterns of histone modifications
Zou, J., Ernst, J.
10.1101/2022.08.02.502571 — Posted: 2022-08-03
Mutagenesis at non-B DNA motifs in the human genome: a course correction
McGinty, R. J., Sunyaev, S. R.
10.1101/2022.02.08.479604 — Posted: 2022-08-15
Recurrent mutation in the ancestry of a rare variant
Wakeley, J., Fan, W. T., Koch, E., Sunyaev, S.
10.1101/2022.08.18.504427 — Posted: 2022-08-18
A statistical genetics guide to identifying HLA alleles driving complex disease
Sakaue, S., Gurajala, S., Curtis, M., Luo, Y., Choi, W., Ishigaki, K., Kang, J. B., Rumker, L., Deutsch, A. J., Schonherr, S., Forer, L., LeFaive, J., Fuchsberger, C., Han, B., Lenz, T. L., de Bakker, P. I. W., Smith, A. V., Raychaudhuri, S.
10.1101/2022.08.24.504550 — Posted: 2022-08-26

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