bioRxiv/medRxiv TRiP Review Activity

394 Reviews — GigaScience — All Subjects

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SpheroScan: A User-Friendly Deep Learning Tool for Spheroid Image Analysis
Akshay, A., Katoch, M., Abedi, M., Besic, M., Shekarchizadeh, N., Burkhard, F., Bigger-Allen, A., Adam, R., Monastyrskaya, K., Hashemi Gheinani, A.
10.1101/2023.06.28.533479 — Posted: 2023-06-28 — Discussion: 2023-11-13  GigaScience
cellsnake: a user-friendly tool for single cell RNA sequencing analysis
Umu, S. U., Rapp Vander-Elst, K., Karlsen, V. T., Chouliara, M., Baekkevold, E. S., Jahnsen, F. L., Domanska, D.
10.1101/2023.05.03.539204 — Posted: 2023-05-04 — Discussion: 2023-11-13  GigaScience
Single-cell transcriptome analysis illuminating the characteristics of species-specific innate immune responses against viral infections
Aso, H., Ito, J., Ozaki, H., Kashima, Y., Suzuki, Y., Koyanagi, Y., Sato, K.
10.1101/2022.12.06.519403 — Posted: 2022-12-07 — Discussion: 2023-11-13  GigaScience
Integrating deep mutational scanning and low-throughput mutagenesis data to predict the impact of amino acid variants
Fu, Y., Bedo, J., Papenfuss, A. T., Rubin, A. F.
10.1101/2022.12.14.520494 — Posted: 2022-12-16 — Discussion: 2023-10-17  GigaScience
Predicting Drug Repurposing Candidates and Their Mechanisms from A Biomedical Knowledge Graph
Ma, C., Zhou, Z., Liu, H., Koslicki, D.
10.1101/2022.11.29.518441 — Posted: 2022-12-02 — Discussion: 2023-09-04  GigaScience
GADMA2: more efficient and flexible demographic inference from genetic data
Noskova, E., Abramov, N., Iliutkin, S., Sidorin, A., Dobrynin, P., Ulyantsev, V.
10.1101/2022.06.14.496083 — Posted: 2022-06-17 — Discussion: 2023-09-04  GigaScience
Haplogenomes of Eucalyptus urophylla and E. grandis
Lötter, A., Duong, T., Candotti, J., Mizrachi, E., Wegrzyn, J. L., Myburg, A. A.
10.1101/2022.08.17.501336 — Posted: 2022-08-18 — Discussion: 2023-09-04  GigaScience
MuLan-Methyl - Multiple Transformer-based Language Models for Accurate DNA Methylation Prediction
Zeng, W., Gautam, A., Huson, D. H.
10.1101/2023.01.04.522704 — Posted: 2023-01-04 — Discussion: 2023-08-21  GigaScience
SODAR: enabling, modeling, and managing multi-omics integration studies
Nieminen, M., Stolpe, O., Kuhring, M., Weiner, J., Pett, P., Beule, D., Holtgrewe, M.
10.1101/2022.08.19.504516 — Posted: 2022-08-22 — Discussion: 2023-08-21  GigaScience
Hetnet connectivity search provides rapid insights into how two biomedical entities are related
Himmelstein, D. S., Zietz, M., Rubinetti, V., Kloster, K., Heil, B. J., Alquaddoomi, F., Hu, D., Nicholson, D. N., Hao, Y., Sullivan, B. D., Nagle, M. W., Greene, C. S.
10.1101/2023.01.05.522941 — Posted: 2023-01-07 — Discussion: 2023-08-21  GigaScience

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