bioRxiv/medRxiv TRiP Review Activity

418 Reviews — GigaScience — All Subjects

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A high-throughput multiplexing and selection strategy to complete bacterial genomes
Arredondo-Alonso, S., Pöntinen, A. K., Cleon, F., Gladstone, R. A., Schürch, A. C., Johnsen, P. J., Samuelsen, O., Corander, J.
10.1101/2021.06.14.448320 — Posted: 2021-06-14 — Discussion: 2022-03-14  GigaScience
Chromosome-scale assembly comparison of the Korean Reference Genome KOREF from PromethION and PacBio with Hi-C mapping information
Kim, H.-S., Jeon, S., Kim, C., Kim, Y. K., Cho, Y. S., Blazyte, A., Manica, A., Lee, S., Bhak, J.
10.1101/674804 — Posted: 2019-06-19 — Discussion: 2022-03-14  GigaScience
Fully resolved assembly of Cryptosporidium parvum
Menon, V. K., Okhuysen, P. C., Chappell, C., Mahmoud, M., Meng, Q., Vee, V., Doddapaneni, H., Han, Y., Salvi, S., Bhamidipati, S., Kottapalli, K., Weissenberger, G., Shen, H., Ross, M. C., Hoffman, K. L., Cregeen, S. J., Muzny, D. M., Metcalf, G. A., Gibbs, R. A., Petrosino, J. F., Sedlazeck, F. J.
10.1101/2021.07.07.451495 — Posted: 2021-07-08 — Discussion: 2022-03-14  GigaScience
DENTIST - using long reads to close assembly gaps at high accuracy
Ludwig, A., Pippel, M., Myers, G., Hiller, M.
10.1101/2021.02.26.432990 — Posted: 2021-02-27 — Discussion: 2022-03-09  GigaScience
Sim3C: Simulation Of HiC And Meta3C Proximity Ligation Sequencing Technologies
DeMaere, M. Z., Darling, A. E.
10.1101/134452 — Posted: 2017-05-15 — Discussion: 2022-02-20  GigaScience
Conventional and hyperspectral time-series imagingof maize lines widely used in field trials
Liang, Z., Pandey, P., Stoerger, V., Xu, Y., Qiu, Y., Ge, Y., Schnable, J. C.
10.1101/169045 — Posted: 2017-07-28 — Discussion: 2022-02-20  GigaScience
CAMITAX: Taxon labels for microbial genomes
Bremges, A., Fritz, A., McHardy, A. C.
10.1101/532473 — Posted: 2019-01-29 — Discussion: 2022-02-10  GigaScience
Vulcan: Improved long-read mapping and structural variant calling via dual-mode alignment
Fu, Y., Mahmoud, M., Muraliraman, V. V., Sedlazeck, F. J., Treangen, T. J.
10.1101/2021.05.29.446291 — Posted: 2021-05-30 — Discussion: 2022-02-06  GigaScience
FASTQuick: Rapid and comprehensive quality assessment of raw sequence reads
Zhang, F., Kang, H. M.
10.1101/2020.06.10.143768 — Posted: 2020-06-11 — Discussion: 2022-02-06  GigaScience
SwiftOrtho: a Fast, Memory-Efficient, Multiple Genome Orthology Classifier
Hu, X., Friedberg, I.
10.1101/543223 — Posted: 2019-02-08 — Discussion: 2022-02-06  GigaScience

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