Channel:  4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

426 Articles

HP1α is a chromatin crosslinker that controls nuclear and mitotic chromosome mechanics
Strom, A. R., Biggs, R. J., Banigan, E. J., Wang, X., Chiu, K., Herman, C., Collado, J., Yue, F., Ritland Politz, J. C., Tait, L. J., Scalzo, D., Telling, A., Groudine, M., Brangwynne, C. P., Marko, J., Stephens, A. D.
10.1101/2020.10.09.331900 — Posted: 2020-10-09
PYMEVisualize: an open-source tool for exploring 3D super-resolution data
Marin, Z., Graff, M., Barentine, A. E. S., Soeller, C., Chung, K. K. H., Fuentes, L. A., Baddeley, D.
10.1101/2020.09.29.315671 — Posted: 2020-09-30
Coarse-Grained Modelling of DNA Plectoneme Pinning in the Presence of Base-Pair Mismatches
Desai, P. R., Brahmachari, S., Marko, J. F., Das, S., Neuman, K. C.
10.1101/2019.12.20.885533 — Posted: 2020-10-04
Automated CUT&Tag profiling of chromatin heterogeneity in mixed-lineage leukemia
Janssens, D., Meers, M. P., Wu, S. J., Babaeva, E., Meshinchi, S., Sarthy, J. F., Ahmad, K., Henikoff, S.
10.1101/2020.10.06.328948 — Posted: 2021-03-10
Chromatin Fiber Folding Represses Transcription and Loop Extrusion in Quiescent Cells
Swygert, S. G., Lin, D., Portillo-Ledesma, S., Lin, P.-Y., Hunt, D. R., Kao, C.-F., Schlick, T., Noble, W. S., Tsukiyama, T.
10.1101/2020.11.24.396713 — Posted: 2021-01-05
Transcriptional Network Orchestrating Regional Patterning of Cortical Progenitors
Ypsilanti, A. R., Pattabiraman, K., Catta-Preta, R., Golonzhka, O., Lindtner, S., Tang, K., Jones, I., Abnousi, A., Juric, I., Hu, M., Shen, Y., Dickel, D. E., Visel, A., Pennachio, L. A., Hawrylycz, M., Thompson, C., Zeng, H., Barozzi, I., Nord, A. S., Rubenstein, J. L. R.
10.1101/2020.11.03.366914 — Posted: 2020-11-04
Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation
Bonora, G., Ramani, V., Singh, R., Fang, H., Jackson, D., Srivatsan, S., Qiu, R., Lee, C., Trapnell, C., Shendure, J., Duan, Z., Deng, X., Noble, W. S., Disteche, C. M.
10.1101/2020.11.20.390765 — Posted: 2020-11-20
HiC-ACT: Improved Detection of Chromatin Interactions from Hi-C Data via Aggregated Cauchy Test
Lagler, T. M., Yang, Y., Abnousi, A., Hu, M., Li, Y.
10.1101/2020.10.28.359869 — Posted: 2020-10-29
DANGO: Predicting higher-order genetic interactions
Zhang, R., Ma, J., Ma, J.
10.1101/2020.11.26.400739 — Posted: 2020-11-27
SPICEMIX: Integrative single-cell spatial modeling of cell identity
Chidester, B., Zhou, T., Alam, S., Ma, J.
10.1101/2020.11.29.383067 — Posted: 2022-04-14

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