Channel: 4D Nucleome

476 Articles

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Trans- and cis-acting effects of the lncRNA Firre on epigenetic and structural features of the inactive X chromosome

FANG, H., Bonora, G., Lewandowski, J., Thakur, J., Filippova, G. N., Henikoff, S., Shendure, J., Duan, Z., Rinn, J., Deng, X., Noble, W. S., Disteche, C. M.

10.1101/687236 — Posted: 2019-06-30

Chemogenetic control of nanobodies

Farrants, H., Tarnawski, M., Müller, T. G., Otsuka, S., Hiblot, J., Koch, B., Kueblbeck, M., Kräusslich, H.-G., Ellenberg, J., Johnsson, K.

10.1101/683557 — Posted: 2019-06-27

Local rewiring of genome - nuclear lamina interactions by transcription.

Brueckner, L., Zhao, P. A., van Schaik, T., Leemans, C., Sima, J., Peric-Hupkes, D., Gilbert, D. M., van Steensel, B.

10.1101/685255 — Posted: 2019-06-27

A chromosome folding intermediate at the condensin-to-cohesin transition during telophase

Abramo, K., Valton, A.-L., Venev, S. V., Ozadam, H., Fox, A. N., Dekker, J.

10.1101/678474 — Posted: 2019-06-21

Multiplex chromatin interaction analysis by signal processing and statistical algorithms

Kim, M., Zheng, M., Tian, S. Z., Capurso, D., Lee, B., Chuang, J. H., Ruan, Y.

10.1101/665232 — Posted: 2019-06-10

HiNT: a computational method for detecting copy number variations and translocations from Hi-C data

Wang, S., Lee, S., Chu, C., Jain, D., Nelson, G., Walsh, J. M., Alver, B. H., Park, P. J.

10.1101/657080 — Posted: 2019-06-03

DNA-segment-capture model for loop extrusion by structural maintenance of chromosome (SMC) protein complexes

Marko, J. F., De Los Rios, P., Barducci, A., Gruber, S.

10.1101/325373 — Posted: 2019-05-23

Inferring diploid 3D chromatin structures from Hi-C data

Cauer, A., Yardimci, G. G., Vert, J.-P., Varoquaux, N., Noble, W.

10.1101/644294 — Posted: 2019-05-21

Jointly embedding multiple single-cell omics measurements

Liu, J., Huang, Y., Singh, R., Vert, J.-P., Noble, W.

10.1101/644310 — Posted: 2019-05-21

Spring Model - chromatin modeling tool based on OpenMM

Kadlof, M., Rozycka, J., Plewczynski, D.

10.1101/642322 — Posted: 2019-05-20

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