bioRxiv/medRxiv TRiP Review Activity

406 Reviews — GigaScience — All Subjects

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Network-based anomaly detection algorithm reveals proteins with major roles in human tissues
Kagan, D., Jubran, J., Yeger-Lotem, E., Fire, M.
10.1101/2023.12.19.572354 — Posted: 2023-12-20 — Discussion: 2025-04-28  GigaScience
Genomic and transcriptomic analyses of Heteropoda venatoria reveal the expansion of P450 family for starvation resistance in spider
Zhang, G., Wang, Y., Jiang, H., Wang, Y.
10.1101/2024.07.31.605936 — Posted: 2024-07-31 — Discussion: 2025-04-03  GigaScience
Healthy microbiome - moving towards functional interpretation
Zielinska, K., Rudnicki, W., Kosciolek, T., Labaj, P. P.
10.1101/2023.12.04.569909 — Posted: 2023-12-05 — Discussion: 2025-04-03  GigaScience
Genomic evidence for hybridization and introgression between blue peafowl and green peafowl and selection for white plumage
Wang, G., Ban, L., Zhang, X., Zhao, X., Ren, X., Chen, A., Zhang, L., Lu, Y., Jiang, Z., Zhao, X., Wen, J., Zhang, Y., Cheng, X., Wang, H., Dai, W., Liu, Y., Ning, Z., Qu, L.
10.1101/2023.12.27.573425 — Posted: 2023-12-27 — Discussion: 2025-03-03  GigaScience
xRead: a coverage-guided approach for scalable construction of read overlapping graph
Kong, T., Liu, B., Wang, Y.
10.1101/2023.05.23.541864 — Posted: 2023-05-24 — Discussion: 2025-03-03  GigaScience
TransHLA: A Hybrid Transformer Model for HLA-Presented Epitope Detection
LU, T., Wang, X., Nie, W., Huo, M., Li, S.
10.1101/2025.01.20.634002 — Posted: 2025-01-24 — Discussion: 2025-03-03  GigaScience
A chromosome-level, haplotype-resolved genome assembly and annotation for the Eurasian minnow (Leuciscidae - Phoxinus phoxinus) provide evidence of haplotype diversity
Oriowo, T. O., Stange, M., Chrysostomakis, I., Martin, S., Brown, T., Winkler, S., Myers, E. W., Boehne, A., Kukowka, S.
10.1101/2023.11.30.569369 — Posted: 2023-12-01 — Discussion: 2025-02-10  GigaScience
Knowledge Graph-based Thought: a knowledge graph enhanced LLMs framework for pan-cancer question answering
Feng, Y., Zhou, L., Zheng, Y., He, R., Ma, C., Li, Y.
10.1101/2024.04.17.589873 — Posted: 2024-04-20 — Discussion: 2025-02-04  GigaScience
PlasGO: enhancing GO-based function prediction for plasmid-encoded proteins based on genetic structure
Ji, Y., Shang, J., Guan, J., Zou, W., Liao, H., Tang, X., Sun, Y.
10.1101/2024.07.03.602011 — Posted: 2024-07-06 — Discussion: 2025-01-05  GigaScience
CAT Bridge: an efficient toolkit for compound-transcript association mining from multi-omics data
Yang, B., Meng, T., Wang, X., Li, J., Zhao, S., Wang, Y., Yi, S., Zhou, Y., Zhang, Y., Li, L., Guo, L.
10.1101/2024.01.21.576587 — Posted: 2024-01-24 — Discussion: 2024-12-05  GigaScience

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