bioRxiv/medRxiv TRiP Review Activity

363 Reviews — GigaScience — All Subjects

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SpheroScan: A User-Friendly Deep Learning Tool for Spheroid Image Analysis
Akshay, A., Katoch, M., Abedi, M., Besic, M., Shekarchizadeh, N., Burkhard, F., Bigger-Allen, A., Adam, R., Monastyrskaya, K., Hashemi Gheinani, A.
10.1101/2023.06.28.533479 — Posted: 2023-06-28 — Discussion: 2023-11-13  GigaScience
Single-cell transcriptome analysis illuminating the characteristics of species-specific innate immune responses against viral infections
Aso, H., Ito, J., Ozaki, H., Kashima, Y., Suzuki, Y., Koyanagi, Y., Sato, K.
10.1101/2022.12.06.519403 — Posted: 2022-12-07 — Discussion: 2023-11-13  GigaScience
Integrating deep mutational scanning and low-throughput mutagenesis data to predict the impact of amino acid variants
Fu, Y., Bedo, J., Papenfuss, A. T., Rubin, A. F.
10.1101/2022.12.14.520494 — Posted: 2022-12-16 — Discussion: 2023-10-17  GigaScience
GADMA2: more efficient and flexible demographic inference from genetic data
Noskova, E., Abramov, N., Iliutkin, S., Sidorin, A., Dobrynin, P., Ulyantsev, V.
10.1101/2022.06.14.496083 — Posted: 2022-06-17 — Discussion: 2023-09-04  GigaScience
Haplogenomes of Eucalyptus urophylla and E. grandis
Lötter, A., Duong, T., Candotti, J., Mizrachi, E., Wegrzyn, J. L., Myburg, A. A.
10.1101/2022.08.17.501336 — Posted: 2022-08-18 — Discussion: 2023-09-04  GigaScience
Predicting Drug Repurposing Candidates and Their Mechanisms from A Biomedical Knowledge Graph
Ma, C., Zhou, Z., Liu, H., Koslicki, D.
10.1101/2022.11.29.518441 — Posted: 2022-12-02 — Discussion: 2023-09-04  GigaScience
SODAR: enabling, modeling, and managing multi-omics integration studies
Nieminen, M., Stolpe, O., Kuhring, M., Weiner, J., Pett, P., Beule, D., Holtgrewe, M.
10.1101/2022.08.19.504516 — Posted: 2022-08-22 — Discussion: 2023-08-21  GigaScience
Hetnet connectivity search provides rapid insights into how two biomedical entities are related
Himmelstein, D. S., Zietz, M., Rubinetti, V., Kloster, K., Heil, B. J., Alquaddoomi, F., Hu, D., Nicholson, D. N., Hao, Y., Sullivan, B. D., Nagle, M. W., Greene, C. S.
10.1101/2023.01.05.522941 — Posted: 2023-01-07 — Discussion: 2023-08-21  GigaScience
A new haplotype-resolved turkey genome to enable turkey genetics and genomics research
Barros, C. P., Derks, M. F., Mohr, J., Wood, B., Crooijmans, R. P., Megens, H.-J., Bink, M. C., Groenen, M. A.
10.1101/2022.08.18.504375 — Posted: 2022-08-18 — Discussion: 2023-08-21  GigaScience
Metaphor - A workflow for streamlined assembly and binning of metagenomes
Salazar, V. W., Shabban, B., del Mar Quiroga, M., Turnbull, R., Tescari, E., Marcelino, V. R., Verbruggen, H., Le Cao, K.-A.
10.1101/2023.02.09.527784 — Posted: 2023-02-10 — Discussion: 2023-08-21  GigaScience

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