bioRxiv/medRxiv TRiP Review Activity

478 Reviews — All Partners — Bioinformatics

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The intersectional genetics landscape for human
Macedo, A., Gontijo, A. M.
10.1101/552984 — Posted: 2019-02-18 — Discussion: 2022-01-31  GigaScience
A field guide for the compositional analysis of any-omics data
Quinn, T. P., Erb, I., Gloor, G., Notredame, C., Richardson, M. F., Crowley, T. M.
10.1101/484766 — Posted: 2018-12-03 — Discussion: 2022-01-31  GigaScience
Refgenie: a reference genome resource manager
Stolarczyk, M., Reuter, V. P., Magee, N. E., Sheffield, N. C.
10.1101/698704 — Posted: 2019-07-12 — Discussion: 2022-01-31  GigaScience
PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria
Bayliss, S. C., Thorpe, H. A., Coyle, N. M., Sheppard, S. K., Feil, E. J.
10.1101/598391 — Posted: 2019-04-05 — Discussion: 2022-01-31  GigaScience
rCASC: reproducible Classification Analysis of Single Cell sequencing data
Alessandri, L., Beccuti, M., Arigoni, M., Olivero, M., Romano, G., De Libero, G., Pace, L., Cordero, F., Calogero, R.
10.1101/430967 — Posted: 2018-10-03 — Discussion: 2022-01-31  GigaScience
SeQuiLa-cov: A fast and scalable library for depth of coverage calculations
Wiewiorka, M., Szmurlo, A., Kusmirek, W., Gambin, T.
10.1101/494468 — Posted: 2018-12-13 — Discussion: 2022-01-31  GigaScience
ascend: R package for analysis of single cell RNA-seq data
Senabouth, A., Lukowski, S., Alquicira, J., Andersen, S., Mei, X., Nguyen, Q., Powell, J.
10.1101/207704 — Posted: 2017-10-23 — Discussion: 2022-01-31  GigaScience
Lilikoi V2.0: a deep-learning enabled, personalized pathway-based R package for diagnosis and prognosis predictions using metabolomics data
Xinying Fang, Yu Liu, Zhijie Ren, Yuheng Du, Qianhui Huang, Lana X. Garmire
10.1101/2020.07.09.195677 — Posted: 2020-07-10 — Discussion: 2022-01-24  GigaScience
Trans-NanoSim characterizes and simulates nanopore RNA-seq data
Hafezqorani, S., Yang, C., Nip, K. M., Warren, R. L., Birol, I.
10.1101/800110 — Posted: 2019-10-10 — Discussion: 2022-01-24  GigaScience
A web-server framework to explore and visualize large genomic variation data in lab and its applications to wheat and its progenitors
Wang, W., Wang, Z., Li, X., Ni, Z., Hu, Z., Xin, M., Peng, H., Yao, Y., Sun, Q., Guo, W.
10.1101/626705 — Posted: 2019-05-16 — Discussion: 2022-01-24  GigaScience

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