bioRxiv/medRxiv TRiP Review Activity

478 Reviews — All Partners — Bioinformatics

Most recent first Previous | Page 33: Articles 321-330 | Next

A MAP of tumor-host interactions in glioma at single cell resolution

Caruso, F., Garofano, L., D'Angelo, F., Yu, K., Tang, F., Yuan, J., Zhang, J., Cerulo, L., Bedognetti, D., Sims, P., Suva, M., Su, X.-D., Lasorella, A., Iavarone, A., Ceccarelli, M.

10.1101/827758 — Posted: 2019-11-01 — Discussion: 2022-01-24 GigaScience

DrivAER: Identification of driving transcriptional programs in single-cell RNA sequencing data

Simon, L. M., Yan, F., Zhao, Z.

10.1101/864165 — Posted: 2019-12-05 — Discussion: 2022-01-24 GigaScience

Streamlining Data-Intensive Biology With Workflow Systems

Reiter, T., Brooks, P. T., Irber, L., Joslin, S. E. K., Reid, C. M., Scott, C., Brown, C. T., Pierce, N. T.

10.1101/2020.06.30.178673 — Posted: 2020-07-01 — Discussion: 2022-01-24 GigaScience

HTSlib - C library for reading/writing high-throughput sequencing data

Bonfield, J. K., Marshall, J., Danecek, P., Li, H., Ohan, V., Whitwham, A., Keane, T., Davies, R. M.

10.1101/2020.12.16.423064 — Posted: 2020-12-16 — Discussion: 2022-01-24 GigaScience

Smash++: an alignment-free and memory-efficient tool to find genomic rearrangements

Hosseini, M., Pratas, D., Morgenstern, B., Pinho, A. J.

10.1101/2019.12.23.887349 — Posted: 2019-12-25 — Discussion: 2022-01-24 GigaScience

Is it time to replace gzip? Comparison of modern compressors for molecular sequence databases

Kryukov, K., Ueda, M. T., Nakagawa, S., Imanishi, T.

10.1101/642553 — Posted: 2019-05-20 — Discussion: 2022-01-24 GigaScience

SoupX removes ambient RNA contamination from droplet based single cell RNA sequencing data

Young, M. D., Behjati, S.

10.1101/303727 — Posted: 2018-04-20 — Discussion: 2022-01-24 GigaScience

GigaSOM.jl: High-perfomance clustering and visualization of huge cytometry datasets

Kratochvil, M., Hunewald, O., Heirendt, L., Verissimo, V., Vondrasek, J., Satagopam, V. P., Schneider, R., Trefois, C., Ollert, M.

10.1101/2020.08.03.234187 — Posted: 2020-08-04 — Discussion: 2022-01-24 GigaScience

CRISPRCasIdentifier: Machine learning for accurate identification and classification of CRISPR-Cas systems

Padilha, V. A., Alkhnbashi, O. S., Shah, S. A., de Carvalho, A. C. P. L. F., Backofen, R.

10.1101/817619 — Posted: 2019-10-31 — Discussion: 2022-01-24 GigaScience

parSMURF, a High Performance Computing tool for the genome-wide detection of pathogenic variants

Petrini, A., Mesiti, M., Schubach, M., Frasca, M., Danis, D., Re, M., Grossi, G., Cappelletti, L., Castrignano', T., Robinson, P. N., Valentini, G.

10.1101/2020.03.18.994079 — Posted: 2020-03-20 — Discussion: 2022-01-24 GigaScience