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510 Reviews — All Partners — Bioinformatics

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Annotation of Hox cluster and Hox cofactor genes in the Asian citrus psyllid, Diaphorina citri, reveals novel features
Shippy, T., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Brown, S. J., DeliaFIXX, T., Saha, S.
10.1101/2021.10.09.463765 — Posted: 2021-10-09 — Discussion: 2022-05-31  Gigabyte
Annotation of Putative Circadian Rhythm-Associated Genes in Diaphorina citri (Hemiptera : Liviidae)
Reynolds, M., de Oliveira, L., Paris, T., Vosburg, C., Massimino, C., Norus, J., Ortiz, Y., Espino, M., Davis, N., Masse, R., Neiman, A., Holcomb, R., Gervais, K., Kemp, M., Hoang, M., Shippy, T., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Brown, S. J., Delia, T., Saha, S.
10.1101/2021.10.09.463768 — Posted: 2021-10-10 — Discussion: 2022-05-31  Gigabyte
Manual curation and phylogenetic analysis of chitinase family genes in the Asian citrus psyllid, Diaphorina citri
Shippy, T., Miller, S., Tamayo, B., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Brown, S. J., D'Elia, T., Saha, S.
10.1101/2021.10.30.466601 — Posted: 2021-11-02 — Discussion: 2022-05-31  Gigabyte
Systematic lncRNA mapping to genome-wide co-essential pathways uncovers cancer dependency on uncharacterized lncRNAs
Mitra, R., Adams, C. M., Eischen, C. M.
10.1101/2022.02.03.478941 — Posted: 2022-02-04 — Discussion: 2022-05-12  eLife
GuideMaker: Software to design CRISPR-Cas guide RNA pools in non-model genomes
Poudel, R., Trujillo Rodriguez, L., Reisch, C. R., Rivers, A. R.
10.1101/2021.06.28.450164 — Posted: 2021-06-29 — Discussion: 2022-04-08  GigaScience
Triku: a feature selection method based on nearest neighbors for single-cell data
Ascension, A. M., Ibanez-Sole, O., Inza, I., Izeta, A., Arauzo-Bravo, M. J.
10.1101/2021.02.12.430764 — Posted: 2021-02-16 — Discussion: 2022-03-20  GigaScience
Linking big biomedical datasets to modular analysis with Portable Encapsulated Projects
Sheffield, N. C., Stolarczyk, M., Reuter, V. P., Rendeiro, A.
10.1101/2020.10.08.331322 — Posted: 2020-10-08 — Discussion: 2022-03-14  GigaScience
To assemble or not to resemble -- A validated Comparative Metatranscriptomics Workflow (CoMW)
Anwar, M. Z., Lanzen, A., Bang-Andreasen, T., Jacobsen, C. S.
10.1101/642348 — Posted: 2019-05-27 — Discussion: 2022-03-14  GigaScience
Empowering the annotation and discovery of structured RNAs with scalable and accessible integrative clustering
Miladi, M., Sokhoyan, E., Houwaart, T., Heyne, S., Costa, F., Gruening, B., Backofen, R.
10.1101/550335 — Posted: 2019-02-20 — Discussion: 2022-03-14  GigaScience
Arteria: An automation system for a sequencing core facility
Dahlberg, J., Hermansson, J., Sturlaugsson, S., Larsson, P.
10.1101/214858 — Posted: 2017-11-06 — Discussion: 2022-03-14  GigaScience

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