bioRxiv/medRxiv TRiP Review Activity

477 Reviews — All Partners — Bioinformatics

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Arteria: An automation system for a sequencing core facility
Dahlberg, J., Hermansson, J., Sturlaugsson, S., Larsson, P.
10.1101/214858 — Posted: 2017-11-06 — Discussion: 2022-03-14  GigaScience
Linking big biomedical datasets to modular analysis with Portable Encapsulated Projects
Sheffield, N. C., Stolarczyk, M., Reuter, V. P., Rendeiro, A.
10.1101/2020.10.08.331322 — Posted: 2020-10-08 — Discussion: 2022-03-14  GigaScience
Benchmark of lncRNA Quantification for RNA-Seq of Cancer Samples
Zheng, H., Brennan, K., Hernaez, M., Gevaert, O.
10.1101/241869 — Posted: 2018-01-02 — Discussion: 2022-03-14  GigaScience
Accessible and reproducible mass spectrometry imaging data analysis in Galaxy
Foell, M. C., Moritz, L., Wollmann, T., Stillger, M., Vockert, N., Werner, M., Bronsert, P., Rohr, K., Gruening, B., Schilling, O.
10.1101/628719 — Posted: 2019-05-05 — Discussion: 2022-03-14  GigaScience
PathwayMatcher: multi-omics pathway mapping and proteoform network generation
Hernandez Sanchez, L. F., Burger, B., Horro, C., Fabregat, A., Johansson, S., Njolstad, P. R., Barsnes, H., Hermjakob, H., Vaudel, M.
10.1101/375097 — Posted: 2018-07-23 — Discussion: 2022-03-14  GigaScience
A Galaxy-based training resource for single-cell RNA-seq quality control and analyses.
Etherington, G. J., Soranzo, N., Mohammed, S., Haerty, W., Davey, R., Di-Palma, F.
10.1101/724047 — Posted: 2019-08-04 — Discussion: 2022-03-14  GigaScience
DENTIST - using long reads to close assembly gaps at high accuracy
Ludwig, A., Pippel, M., Myers, G., Hiller, M.
10.1101/2021.02.26.432990 — Posted: 2021-02-27 — Discussion: 2022-03-09  GigaScience
Ubiquitin Proteasome Pathway annotation in Diaphorina citri can reveal potential targets for RNAi based pest management
Tank, W., Shippy, T., Thate, A., Massimino, C., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Brown, S. J., Delia, T., Saha, S.
10.1101/2021.10.11.464014 — Posted: 2021-10-13 — Discussion: 2022-03-09  Gigabyte
Identification of residue inversions in large phylogenies of duplicated proteins
Pascarelli, S., Laurino, P.
10.1101/2021.11.04.467263 — Posted: 2021-11-04 — Discussion: 2022-02-22  Review Commons
Annotation of glycolysis, gluconeogenesis, and trehaloneogenesis pathways provide insight into carbohydrate metabolism in the Asian citrus psyllid
Tamayo, B., Kercher, K., Vosburg, C., Massimino, C., Jernigan, M. R., Hasan, D. L., Harper, D., Mathew, A., Adkins, S., Shippy, T., Hosmani, P. S., Flores-Gonzalez, M., Panitz, N., Mueller, L. A., Hunter, W. B., Brown, S. J., Delia, T., Saha, S.
10.1101/2021.10.11.463922 — Posted: 2021-10-12 — Discussion: 2022-02-20  Gigabyte

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