bioRxiv/medRxiv TRiP Review Activity

477 Reviews — All Partners — Bioinformatics

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Standardized genome-wide function prediction enables comparative functional genomics in plants: a new application area for Gene Ontologies
Fattel, L., Psaroudakis, D., Yanarella, C., Chiteri, K., Dostalik, H. A., Joshi, P., Starr, D. C., Vu, H., Wimalanathan, K., Lawrence-Dill, C. J.
10.1101/2021.04.25.441366 — Posted: 2021-04-28 — Discussion: 2022-08-09  GigaScience
Improving the annotation of the Heterorhabditis bacteriophora genome
McLean, F., Berger, D., Laetsch, D., Schwartz, H., Blaxter, M.
10.1101/225904 — Posted: 2017-11-30 — Discussion: 2022-08-09  GigaScience
Evaluation of in silico predictors on short nucleotide variants in HBA1, HBA2 and HBB associated with haemoglobinopathies
Tamana, S., Xenophontos, M., Minaidou, A., Stephanou, C., Harteveld, C. L., Bento, C., Traeger-Synodinos, J., Fylaktou, I., Yasin, N. M., Hamid, F. S. A., Esa, E., Halim-Fikri, H., Zilfalil, B. A., Kakouri, A. C., ClinGen Hemoglobinopathy VCEP, , Kleanthous, M., Kountouris, P.
10.1101/2022.04.07.484934 — Posted: 2022-04-09 — Discussion: 2022-08-02  eLife
CulebrONT: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes
Orjuela, J., Comte, A., Ravel, S., Charriat, F., Vi, T., Sabot, F., Cunnac, S.
10.1101/2021.07.19.452922 — Posted: 2021-07-20 — Discussion: 2022-07-22  Peer Community In
Comprehensive machine-learning survival framework develop a consensus model in large scale multi-center cohorts for pancreatic cancer
Wang, L., Liu, Z., Liang, R., Wang, W., Zhu, R., Li, J., Xing, Z., Weng, S., Han, X., Sun, Y.-l.
10.1101/2022.05.15.492020 — Posted: 2022-05-16 — Discussion: 2022-07-18  eLife
Nomograms of Human Hippocampal Volume Shifted by Polygenic Scores
Janahi, M., Aksman, L. M., Schott, J., Altmann, A.
10.1101/2022.02.17.480931 — Posted: 2022-02-19 — Discussion: 2022-06-30  eLife
A practical tool for Maximal Information Coefficient analysis
Albanese, D., Riccadonna, S., Donati, C., Franceschi, P.
10.1101/215855 — Posted: 2017-11-07 — Discussion: 2022-06-23  GigaScience
Annotation of Putative Circadian Rhythm-Associated Genes in Diaphorina citri (Hemiptera : Liviidae)
Reynolds, M., de Oliveira, L., Paris, T., Vosburg, C., Massimino, C., Norus, J., Ortiz, Y., Espino, M., Davis, N., Masse, R., Neiman, A., Holcomb, R., Gervais, K., Kemp, M., Hoang, M., Shippy, T., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Brown, S. J., Delia, T., Saha, S.
10.1101/2021.10.09.463768 — Posted: 2021-10-10 — Discussion: 2022-05-31  Gigabyte
Manual curation and phylogenetic analysis of chitinase family genes in the Asian citrus psyllid, Diaphorina citri
Shippy, T., Miller, S., Tamayo, B., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Brown, S. J., D'Elia, T., Saha, S.
10.1101/2021.10.30.466601 — Posted: 2021-11-02 — Discussion: 2022-05-31  Gigabyte
Annotation of Hox cluster and Hox cofactor genes in the Asian citrus psyllid, Diaphorina citri, reveals novel features
Shippy, T., Hosmani, P. S., Flores-Gonzalez, M., Mueller, L. A., Hunter, W. B., Brown, S. J., DeliaFIXX, T., Saha, S.
10.1101/2021.10.09.463765 — Posted: 2021-10-09 — Discussion: 2022-05-31  Gigabyte

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